Photinus pyralis (common eastern firefly): 116176404
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Entry
116176404 CDS
T07438
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03013
Nucleocytoplasmic transport
ppyr03015
mRNA surveillance pathway
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116176404
09122 Translation
03013 Nucleocytoplasmic transport
116176404
03015 mRNA surveillance pathway
116176404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116176404
03041 Spliceosome [BR:
ppyr03041
]
116176404
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116176404
TREX complex
116176404
Spliceosome [BR:
ppyr03041
]
Complex C
Other components
EJC/TREX
116176404
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116176404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
Motif
Other DBs
NCBI-GeneID:
116176404
NCBI-ProteinID:
XP_031350803
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MKMVDKIDMSLDDIIKSNRGGRRGGGAKRGGRGAIRAGSGRRGGGNFRRSTGGVQRGRSR
GGIARQYTRGDVNSAWKHDLFEGYGPRKVAAARSLVQSNVGPTKLMVSNLDFGVSDSDIQ
ELFAEFGPLKSAAVHYDRSGRSLGTADVIFERRADAIKAMKQYHGVPLDGRAMNIQLTTS
EIPSVTRGGRLGQNRFSSRTQSMPRRGGTGGGKGRPGRGRGRGARNQKKPPTAEELDAEL
DAYSKEMK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggttgataaaatcgacatgagtttggatgatattattaaatcgaataggggt
ggtcgacgaggcggcggagctaaacgtggtggaagaggtgcaatccgtgcaggtagtggc
cgccgtggcggcgggaatttcagaagaagcaccggcggcgtacaaagaggccgcagtcgc
ggtggaattgctaggcaatacaccaggggagacgtgaacagtgcttggaagcacgacctt
tttgagggttacggcccacgtaaagttgcggcggccagatctttagtacagtccaatgtc
ggtccgactaaattaatggtatccaatctcgatttcggcgtatccgattcggatatacaa
gaattgtttgccgaatttggaccgttgaaaagtgccgccgtacattatgatcggtccgga
cggtctctcggtactgccgatgtcatttttgaaaggcgagcagacgcaataaaggctatg
aaacaataccacggcgtgccgttagatggacgtgccatgaacattcaacttactacctct
gaaataccgtcagtcactcgcggcggtcgtttgggtcagaatcggttcagtagtcgtact
cagtcaatgccacgaagaggaggtactggcggcggtaaagggcgacctggaagaggtcga
ggtaggggtgctagaaatcaaaagaaaccgcctacggctgaagaactggatgccgagtta
gacgcatacagtaaagaaatgaagtag
DBGET
integrated database retrieval system
