Photinus pyralis (common eastern firefly): 116176720
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Entry
116176720 CDS
T07438
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116176720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyr03041
]
116176720
Spliceosome [BR:
ppyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
116176720
Complex C
U5 SnRNP specific factors
116176720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_RFWD3
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD_LRWD1
Ge1_WD40
Nbas_N
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
116176720
NCBI-ProteinID:
XP_031351333
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MISESKRKADDSALVPVSKKTRNEVAVSRNKALSSTTVARTSNLFAPIMLLEGHEGEIFT
LEFHPEGQYLASSGFDRRIFLWSVYGECENLSVMSGHTGAVMELHFSPDGSHIFTASTDH
TLGLWDIATGQRVKKYKGHTNFVNSCQGARRGPQTLVSGSDDSTIRLWDTRKRNSVSTIS
TPYQVTAVTFSDTAEHIYSSGIDNEIKVWDIRKNELLYSMRGHADTVTGISLSPDGSYLL
TNAMDNTLRIWDIRPYAPQERCVKVFTGHLHNFEKNLVRCSWSADGSKVSSGSADRYMYI
WDTTSRRIIYKLPGHNGSVNDVDFHPNETIIASGSSDKQIYLGEIE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgaaagtaaaagaaaagcggacgattcggctttggtgccagtttcaaagaaa
acacgtaacgaagtcgccgtttcacgaaataaagcgctctcatcgacgacagtagcccgt
acttccaacctattcgcacccattatgcttctagagggacacgagggcgagattttcaca
ttggaatttcaccccgaaggacagtatttagcgtcatcagggttcgatcgtcgtatattt
ttatggtctgtttatggagagtgtgaaaatttatcggtcatgtccggccatacgggggcc
gtaatggaattgcacttttcacctgacggctcccatatattcacggcaagcacagatcat
acacttggattatgggacatcgcaacagggcaacgagtaaaaaagtacaagggacatacc
aattttgtcaattcctgccaaggtgcgagacgcggtcctcaaactttggtgtcaggaagt
gatgattctacgattcgcttgtgggataccagaaaacgaaatagcgtttcaacaattagt
accccgtaccaggtaaccgccgtcacctttagcgataccgccgaacacatttacagcagc
ggaattgacaatgaaattaaggtttgggatatacgaaaaaatgaattattgtatagcatg
cgtggacacgcggataccgttaccggtatatcgctaagcccggacggttcgtatttgtta
acaaatgccatggacaatacgttaagaatatgggatataagaccttatgcaccgcaagaa
cgctgtgtcaaagtatttacaggacatttgcataattttgaaaaaaatcttgtacggtgc
tcttggtcggctgatgggagtaaagtgagcagtggttcagctgatcgttacatgtacatt
tgggacacgacctctcgccgaattatatacaaattgcctggacataatgggagcgttaat
gatgtggattttcatcctaatgaaacaataattgcatctggttcaagtgacaaacaaatt
tatttaggcgagatcgagtaa
DBGET
integrated database retrieval system
