Photinus pyralis (common eastern firefly): 116176787
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Entry
116176787 CDS
T07438
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116176787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116176787
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116176787
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
116176787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
SH3-C_UBE2O
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
116176787
NCBI-ProteinID:
XP_031351406
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MTKPLICVPGQRLCILDKTHESGQGTYERQGYIYSSLAGVVDVVDKDGVKVVEVQSTGEQ
TLVPTQGDIVTAQVTILTQDFCKCVIKCIGNTVLSRTYRGILRREDVCATDKDRVQIYKS
YRPGDVILARVLPITEAHTYNLSTAENELGVVIAHSEHGYPMVPISWTQMQCTKMYTKEL
RKVAKVVPENMNTKT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaccactaatatgtgttcctggccaacggctttgtattctcgacaagacccac
gaatctggccaaggaacctacgaacgacagggatatatttattcttccttggccggcgtt
gtagatgtggtggataaggatggcgtgaaagtggtcgaagtgcaaagtactggggaacag
accttagttcccacacaaggagatattgttacggctcaagttacgatattgacccaagac
ttttgcaagtgcgtaataaagtgcatcggaaacacggtgcttagccgaacgtatagggga
attttaagaagagaagatgtatgcgcaaccgacaaagatcgcgtacaaatttacaaaagt
tatcgtcctggcgatgtaatcttggcacgagtcttaccgataaccgaagcacacacgtac
aacctgtcgacagccgaaaacgaattaggtgttgtcatcgcgcattccgaacacggttat
ccgatggtaccaattagctggacgcaaatgcagtgcacgaaaatgtacacgaaagaactg
agaaaagttgcaaaggttgtccccgagaatatgaacacaaaaacgtaa
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