Photinus pyralis (common eastern firefly): 116178174
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Entry
116178174 CDS
T07438
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03013
Nucleocytoplasmic transport
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116178174
09122 Translation
03013 Nucleocytoplasmic transport
116178174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116178174
03041 Spliceosome [BR:
ppyr03041
]
116178174
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116178174
Spliceosome [BR:
ppyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116178174
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
116178174
NCBI-ProteinID:
XP_031353454
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MVKETSANSSRESSIKKRRKNPIGDPEVESDIYKKVIAFEEKEAFKRTAASDIKLCLEIC
EHIRNIMLEIVELRCRKPPDFAAKLYDKTVQGCSYIIMLKKFNRLDRVRMTSSREAIATD
RHKNDSTELQYQNLLYESAHLSSEIKKCKQFKSKDEDVELVSVEEFLQDAPAAKTKPFKN
YPNLDNTQKHELHLARLEWELTQRKKLAQQCSSLEDEKKQIAADILKTKNRLSELLPKLV
TVLDTMKPLHEDLGLPVEKSYVEERQRFLLPDPLFIFYANADGFKEVHGINITLNILGEQ
DEAIRWKESQNISIFQNDDTDAENDRQEIEESVEVVKKRRHRKASQIDKNEERRKLLLEV
HPLSVQLIIHHKSGSVLTMQFFYLTSLNIIAVTSDVQFSDHITGCGAKEVLYGENILKEL
FTGDFGLDSPNPLNQYQLKKIGLNSYQSLVPTLGYVYSWAQKVCGLEFLMSQRLKAESSV
SGRHIDIVMNALNKRLGSRTSLAVQLQQLEQNVMPTVPESVDMPQNVISSLAKWTSISWQ
NFCEATCTAALLASEMVSSSDLFYCATITRTRASIKAYIAIQNDYPKQTPIFCLNAFCDG
EFHSGNCDQIRDMERAVNVEWSNSSAHSATWLLAAQLRYLCAYFDVFLEIQSPVTYAQNA
VFFKNMCGRNKRRPFKFRKVGTGFFTQF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaaacaagcgcaaattcctctcgagagagttcgattaaaaaaagacgtaaa
aatccaattggagatccagaagttgaaagtgatatatacaagaaagttattgccttcgaa
gagaaggaagcgtttaagcgaaccgccgctagtgatattaaattgtgcctcgagatatgc
gagcacataaggaacataatgctagaaattgtcgagttacgatgccgtaaaccaccggac
tttgcagcgaaattgtatgataagactgttcagggatgttcgtatattattatgttgaaa
aaatttaatcgattagatcgtgttcgtatgacttcttcacgtgaggcgattgccaccgac
aggcataagaacgacagcacagaattacaatatcagaatcttctatacgaatccgcccac
ttgtcctctgagattaaaaagtgtaaacagttcaagtcgaaggatgaagatgtggagctt
gtaagtgtggaggagtttcttcaggatgcgcccgccgcgaagacgaaaccatttaaaaat
tatccgaatttggataatacccagaaacatgagcttcacctggcaagactggaatgggaa
ttaacgcaaagaaaaaaattggctcaacagtgcagtagcttggaagacgaaaaaaagcaa
atagcagcagatattttaaagacaaagaatcgactctcggaattgttgccaaagttggtc
acagttttggatactatgaaaccactgcatgaggacttgggtttgcctgttgaaaaaagt
tatgtggaagaaaggcaaagatttctgttgcccgatcctttgttcattttttatgcaaat
gctgacggctttaaggaagttcacggtataaatatcacattaaacatcctaggagagcaa
gacgaagctatccgttggaaagaatcccaaaatatttccatttttcaaaatgatgacact
gatgcagagaatgaccggcaagaaattgaagagagtgtggaggtggtcaaaaaaagacgt
catcgtaaagccagtcaaattgataagaatgaagagcgtcgtaaactcttgctggaggtc
catcctttgtcagttcagcttataattcatcataagagtggcagtgtcttgacgatgcaa
tttttttatttgacctcattaaatattatcgctgttacatctgatgtccaattttcggat
cacattactggatgcggcgccaaagaagttctttatggagaaaacatactgaaggaatta
ttcaccggagattttggccttgacagcccgaatcctttaaaccagtaccaattgaaaaag
atcggtctcaactcctatcagtccctcgttccaactttgggctatgtgtattcgtgggca
caaaaggtttgcggattggaatttctaatgtcgcagagattgaaagccgaaagcagtgtc
agtggccgccatattgacatcgtcatgaacgctttgaataaacgactcggctcaagaaca
tcattggcagtgcagttgcagcagcttgagcaaaacgtaatgccaaccgtcccggagtct
gtcgacatgcctcaaaatgtcatctcttcattggccaagtggacctccatcagttggcaa
aatttttgcgaagcaacatgcacagccgctttactagcgagtgagatggtttcttcaagt
gatctcttttattgtgccacaatcaccagaacaagagcttcgattaaagcttatatcgcc
attcaaaatgattatcccaagcaaactccgatattttgcttgaatgcgttttgtgatggg
gaatttcattcaggaaattgcgaccagatcagggatatggaaagagcggtaaacgtggaa
tggagtaatagcagtgctcatagcgccacttggttgttggcagcacagcttcgctatctt
tgtgcatactttgatgttttcctggagattcaatcacctgtaacttatgcccaaaatgca
gtattttttaagaatatgtgtggacgcaataagagacgaccgtttaaattcagaaaagtt
ggaactggattttttacacaattttaa
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integrated database retrieval system
