Photinus pyralis (common eastern firefly): 116178382
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Entry
116178382 CDS
T07438
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03008
Ribosome biogenesis in eukaryotes
ppyr03013
Nucleocytoplasmic transport
ppyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116178382
03015 mRNA surveillance pathway
116178382
03008 Ribosome biogenesis in eukaryotes
116178382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116178382
03009 Ribosome biogenesis [BR:
ppyr03009
]
116178382
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116178382
mRNA cycle factors
Stress granule specific factors
116178382
Ribosome biogenesis [BR:
ppyr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
116178382
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
RRM_NXF1-2
LRR_4
LRR_9
LRR_NXF2
LRR_8
UBA_8
Motif
Other DBs
NCBI-GeneID:
116178382
NCBI-ProteinID:
XP_031353728
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MPKPGKYNNPPWKKQFNNEHDSRGNEFNNHRRGTGLHTNGHFKPAKKNWNPHWGNALRAH
LDDEDIDMGVSNFERQKKPIRGNKRHGTSGGRGRRKLLESPTNWFRVTLPYGNKYDKAFV
LRSLLEHVTPIPFAPVAWSTDGNFATFYVDDYKLADKLNSLDRQIDCPDGFKLAIRVHSG
SPNVDITDSLKAKLKAAMANRYDLANKALDLTKFHADPQLQDVFCALFKPIMLLTVIDIM
SENIPELVALNLNENRIQVLNHLKKIDKKLPNLKILHLGNNKIREMTMLDPLSGLPIVEV
VLDGNPLCTKFREREAYISEVRKRFPKVIKLDGIDLPPPIGFDIAEEVRLPPSVQTYLCN
AEAQGIVRQFLEQYFQVFDSGSRQPLLQAYHEDAKFSMTSAYPYGQNPKNSSWLNWYNTD
SRNILRVQDHDRRLKLLKQGNLAVVSFLSEMPQSKHDIHSFTVDLNISTPQLLLLNVSGM
FRELRSGHKTAPIRHFFRSLVIVPAGSGFCIANEQLHVSNATEQQAKLAFKTPIIQTPQP
APELNAAPPAAAIPPVVPMVDDNTKQQMIQTMSQQSGMNLEWSQKCLEETNWDFNRAAFI
FTELQKQGTIPAEAFVK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcccggaaagtacaataatccaccctggaagaagcagttcaacaacgaacac
gactcacgtggcaatgagtttaacaatcatcgcagaggtactggcctacacacaaatgga
cattttaaaccggcaaaaaagaattggaacccgcactggggtaatgcacttcgtgcacac
ttggacgatgaagacattgatatgggagttagtaactttgaacgccaaaaaaaacctatc
cgtggcaataaacgacatggaacgagcggaggtcgtggtagaagaaaattacttgaaagc
cccactaattggtttcgagtgacccttccatacggcaacaaatacgacaaggcgtttgtg
ctacgttcattactggaacatgtcacaccaattccgtttgcgcccgttgcctggagcaca
gacggaaattttgccacattttacgtagacgattacaaactagcggataaattaaattca
ctcgacagacaaatcgactgccctgacggatttaagttggcaattcgcgtgcacagcggc
tcgccgaacgtcgacattaccgactcgctcaaagcaaaattgaaagccgccatggcgaat
cgatacgaccttgcgaataaggcgttagatctgacgaagtttcacgccgatccgcaactc
caagatgttttctgcgcgctgttcaaaccgataatgttattgactgtcattgacattatg
tccgaaaatatacctgaattggtggcgttaaatttaaacgaaaatcgtattcaagtttta
aatcatcttaagaaaatcgataagaagcttccaaacctcaaaatattacatctggggaat
aataagatacgagaaatgacaatgctcgaccctttgtccggattacccatagttgaggtg
gttctcgatggaaatccactctgcaccaaattcagggaacgagaagcatacattagcgaa
gtcagaaagcgatttcctaaggtcatcaaactggatggaatcgacttaccgccgccgatc
ggtttcgacatagccgaagaggtacgattacccccgagcgttcagacgtacctttgcaat
gccgaggctcaaggtatcgtccgacagttcttggagcagtatttccaagtattcgatagc
ggctcgcggcagccgctattgcaagcgtatcacgaggacgccaagttttcgatgacctcg
gcgtatccgtacggacagaatcctaaaaactcgagctggctcaattggtataatacggac
agtagaaatatactgcgcgtgcaggaccacgacaggcggctaaagttgctgaagcaaggc
aatttggctgtggtttctttcttgtctgaaatgccccaatcgaaacatgatatccacagc
tttacagtggatttaaatatatcaacgccgcaactgttgttattaaacgtcagcggaatg
ttcagagagctgcgtagtggccacaaaactgctccgatacgacatttctttagatcatta
gttattgtaccggccggttccggattttgtatagcgaatgagcagttgcacgtctccaac
gctaccgaacaacaagcaaagctcgccttcaaaacacctattattcaaacacctcaaccg
gcaccggaattaaatgccgcaccacccgctgccgccattccaccggtagtgccaatggtg
gacgacaatacgaaacagcaaatgattcaaactatgtctcaacaatccggaatgaattta
gagtggtcacagaaatgtttggaggaaacaaattgggacttcaatcgcgccgcgttcatt
ttcaccgaattacagaaacaagggacgataccggccgaagcttttgttaaataa
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integrated database retrieval system
