Photinus pyralis (common eastern firefly): 116178622
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Entry
116178622 CDS
T07438
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116178622
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
116178622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_4
RuvA_C
zf-CCCH_2
Lipoprotein_21
Motif
Other DBs
NCBI-GeneID:
116178622
NCBI-ProteinID:
XP_031354031
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSTSSVGTVYIKSACTPLLKENLSRISVLFSAFLSEKGAQDDVISFEVSYAIAGSSSRKP
SPDFISRLQKYVDEICREGCAGAVAGEDSSYDSDYEADLPSRHNDVSRTTSDTLAAEYAE
YVQTLPDISPGYTARVEFALKLGYTEKLVQAALQKLGRSPAQNELLEELIKLDAQRGTSS
CDSSPVENQLDGIEYQTDCLVSHVLRPIVIDGSNLAMSHGNKEIFSCRGIKICVDWFKTR
GHKDITVFVPKWRKEAPRPDNPIRDQEILAELEKDRVLVFTPSRLVGGKRMVCYDDRYIL
KLASDVDGIVVSNDNYRDLAQENNEYRKVVEERILMYSFVNDRFMPPDDPLGRSGPTLDN
FLRCQPRKGDPPPPCPYAKKCTYGNKCKYHHPERGPLPHKSVTERLSEYAQRHLQAREGE
IRKTPLGRTRSNVPPPKEVQHTVVAKSRSVDNVGATYPPIPPPAENLHKKLQRQLTLNPS
NDPRLVRMRFVSPIQPQIQQSFLTPNHPNWELHQHVQRIASAPDSYRPWPPNTHVQHRQM
QRISSCSDPQLNVYPAHWPQSASVQEDARRKLHYHLSAIFPEEQVTQAMQLYPDETNPQK
ICAAILAMFPAK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtctacatcgagtgtgggtacagtgtatataaaatctgcatgtacaccattactcaaa
gaaaacctcagcaggatttcggtattattttcggcgtttcttagtgagaagggtgctcaa
gatgatgttataagtttcgaagtgagttacgccatcgcgggatcgtcgagtcgaaaaccg
agtccggattttataagcaggttacagaaatatgtagatgaaatatgtcgcgagggatgt
gcgggcgcggtggcgggagaggattcaagttacgattcagactacgaggccgatcttccg
tcgagacacaacgatgtttcgcgaacgactagcgatactcttgccgccgagtacgcggag
tacgttcagactcttcccgacatctcgcctggatatactgctagagtggagtttgcgctc
aaattgggatacacggagaaattagtacaggcagcgttgcaaaagttaggtcgctcacct
gcacaaaatgaacttttagaagaattaattaagttagacgcacaacgtggaacgtcatct
tgtgatagcagcccggtagaaaatcaactagacggtatcgagtatcaaaccgactgtctc
gttagtcacgtactcagacccatagtgatagacggcagtaatttggccatgagccatgga
aacaaggaaatcttctcctgtcgcggtattaaaatatgcgtggattggtttaaaacgaga
ggacataaggatataacggtcttcgtaccgaaatggagaaaggaagctcccagacccgac
aatcccattcgtgaccaagagatcttggccgaactagaaaaagatagggtgcttgtcttt
acaccgtcccgattagtcggcggaaaacgcatggtgtgttacgacgacaggtacatactc
aaactcgcttcggacgtcgacggcattgtcgttagtaatgataattatcgcgacttggcc
caagaaaacaatgaatatcgcaaagtggtggaggaacgcattttgatgtactcatttgtg
aacgatcgcttcatgccgcccgatgatcctttgggacgatcaggccccacgcttgacaat
ttcctaaggtgccaaccgagaaagggcgatccgccccctccatgtccgtacgcaaagaag
tgcacttacggtaataagtgcaaatatcaccatccggaacgaggacctctccctcacaag
agtgtaacagaaagactatccgaatatgcacaacgccatctacaggcgcgcgagggcgaa
attcgcaagacgccgctcggcagaacgcgctccaacgtcccgccacccaaagaagttcag
cacacggtcgtcgcgaaaagccgtagcgtggataacgtcggcgccacttaccctcccatc
ccacctcccgccgaaaacctacacaagaagctccaacgccagctcaccctaaacccgtcg
aacgacccgcgcctcgtccgcatgcgattcgtatcaccgattcagccacaaatccaacag
tctttccttacacccaaccatcccaattgggagctgcaccagcacgtgcaacgcatagct
tccgcccccgactcatatcggccgtggcctcccaatactcacgtacagcatcgacagatg
caacgtatctcgagctgctccgatccacagctaaacgtttacccggctcactggccgcag
agcgcctccgtccaagaggacgccagacgcaaactgcactaccacttgtcggcgattttt
cccgaggagcaggtaacgcaagccatgcagctatatccggacgaaacgaatccccaaaaa
atatgtgccgctattttagctatgtttccagctaagtag
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