Photinus pyralis (common eastern firefly): 116180324
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Entry
116180324 CDS
T07438
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116180324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppyr03021
]
116180324
03041 Spliceosome [BR:
ppyr03041
]
116180324
03036 Chromosome and associated proteins [BR:
ppyr03036
]
116180324
Transcription machinery [BR:
ppyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116180324
Spliceosome [BR:
ppyr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
116180324
Complex B
116180324
Complex C
U2 SnRNP specific factors
116180324
Chromosome and associated proteins [BR:
ppyr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
116180324
TFTC complex
116180324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
WDR55
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
116180324
NCBI-ProteinID:
XP_031356114
UniProt:
A0A1Y1LLA2
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MYLYNLTLQRATAITHAVHGNFSGTKQQEIIISRGKSIELLRPDPNTGKVHTLLTVEIFG
IVRSLMGFRLTGGTKDYIVVGSDSGRIVILEYIVAKNAFEKIHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHMVGVDVGYENP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGVNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDVVTEIKLKYFDTVPVATAMCVLKTGFLFVASEFGNHFLYQ
IAHLGDDDDELEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMESLSPILSCRVADLAGEDT
PQLYMLCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRSDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCAALSDDALVQVYPDGIRHICSDKRVNEWKAPG
KKTIVKCAVNQRQVVIALSGGELVYFEMDPTGQLHEYKDRKRMNSDVVCMALANVAPGEQ
RSWFLAVGLADNTVRIISLDPTDCLSPRSMQALPVCPESLCIVEMGCTERNPEDAAAAST
TSTLYLNIGLQNGALLRTVLDPVSGDLTDTRTRYLGSRPVKLFRIRMQDSEAVLAMSSRS
WLSYYYQSRFYLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQISF
PLEYTPRKFVIHPETSNIIMLETEHNAYTEDTKKQRRLQMAEEMREAAGEEEQELAKEMA
EAFLNEDLPENIFSAPKAGHGMWASTMRIMDPVQGTTFKMKRFEQNEAAMCISLVKFNGQ
PEHQWFLIVGVAKDLQLNPRLCISGYIDTYKVEMSCRELELIHRTPVEEVPYAVCSYNGR
LLAGVGRLLRLYDYGKKKLLRKCENKHIPNLIVNIQAMGRRIFVADVQESIYMVRYKKHE
NQLIIFADDTHPRWITCTSVLDYDTVATADKFGNIGIVRLPPNTTDDVDEDPTGNKSLWD
RGLLNGASQKADTIATFHVGETVTWLQKATLIPGGWESLIYTTVSGSVGVLVPFTSHEDH
DFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQYNSLEPSKQKSIAIDLE
RTPAEVSKKLEDIRTRYAF
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtatctatacaatctaactttgcaaagggctacggcaattacccatgccgttcacggt
aacttttcgggcacaaaacaacaagagatcattatttcacgaggcaaaagcatagaattg
ctgaggccggatccgaacacgggaaaggtacacacgttactaacggtggaaatattcggc
atcgtaagatcgttgatgggatttcgtctgaccggcggtaccaaagattacattgtggtc
ggttcggattccggtcgaatcgttatactagagtatattgtcgctaaaaatgcgtttgaa
aagatacatcaagaaacctttggtaaatcgggttgtcggcgaatcgtccccggacaatac
ttggccatagatcccaagggaagagccgtaatgataggcgcaattgagaagcagaaactt
gtttatattctgaatcgtgatccggaagctcgtctcaccatctcgtcacctttagaggcg
cacaagagcaatacgttagtatatcacatggtcggtgttgatgtcggttacgaaaaccca
atgtttgcttgtttagagatcgattacgaggaggcggattccgatccgaccggcgaggcg
gcgcagaaaacacagcaaacgctaaccttctacgaacttgacttgggtgtgaaccacgtg
gtacgcaaatattctgaaccgttagaggagcacgcgaattttcttgtttcggtgcccggc
ggtaatgacggtccctccggtgtattgatctgttccgaaaattatttgacatacaaaaac
ttgggtgaccagcatgatattcgttgccccataccgaggcggaggaatgatttggacgac
cccgaaagggggatgatcttcgtttgttctgccactcacaagacgaagtcgatgttcttc
tttttggcgcagactgagcagggagacatatttaagattactttggagactgatgaggat
gttgtcacagaaattaagttgaagtacttcgacactgtaccagtggcgactgcgatgtgc
gtgttgaagactggatttttattcgtcgcgtcggagttcggaaatcactttctgtaccaa
atagcacatttgggtgacgacgacgacgagttggagttcagttcggccatgccgctggaa
gagggcgacacgttcttcttcgcacctcgtcccctgagaaatttagtccttgtggatgaa
atggaatcgctatctccaatattgtcgtgcagggttgctgatttggccggcgaggacact
ccacagttgtacatgctgtgcgggcgcggtcccagatcgtcgcttagagttctacggcac
ggtcttgaggtctcggaaatggcggtttcggaactgcccggaaatccgaacgcggtctgg
acagtaaaacgtagaagcgatgatgaatttgatgcttacattattgtgtctttcgtcaat
gctacccttgtgttgtcgattggggagactgttgaagaagttacggacagtggttttttg
ggtaccactcctacgctatcctgtgctgctttaagcgacgatgcactagtacaggtttat
cctgatggaattcgacacatttgctccgataagcgggtcaatgagtggaaggcacctgga
aaaaagaccattgttaaatgcgcggtgaaccagaggcaggtggtcatagcgttatcggga
ggagagttggtgtatttcgaaatggatccgacgggtcagttgcacgaatacaaagaccgt
aagcggatgaattcagatgtagtctgtatggcattagcaaatgtggcacctggagagcaa
cgttcttggtttctcgcagtcggcttggcagataacactgtcagaattatatcgttagat
ccaaccgattgtctatcgccccgctctatgcaggcactacccgtgtgtccggaatcactt
tgtattgtcgaaatgggttgtacagaacgtaaccctgaagatgctgcagctgctagcacc
acaagtaccttgtatttaaacattggtttacaaaatggtgctctcctcaggactgtattg
gatcctgtttcgggtgatttgaccgataccagaacaagatatcttggctcgcgacccgtc
aagctattccgcataagaatgcaagactcggaagcagtattggctatgagcagtcgttcg
tggctaagttactactatcaaagccgtttctatttaacacccttgtcatatgaaagttta
gagtacgcgtccggtttcagttccgagcaatgtcccgagggtattgttgcaatttccact
aacactcttcgtattttggccttggaaaaattgggcgcagttttcaatcagatttcgttt
ccccttgagtatacgccacgaaaatttgttatccatccagagacgtccaatattattatg
ctagagacggaacataatgcctacactgaggatacaaaaaagcagcgccgtttgcagatg
gcggaagaaatgcgcgaggcggcaggtgaagaagaacaagagttggcaaaggaaatggcg
gaagcttttttaaatgaggacttgccggaaaatatcttctctgcgccgaaagcgggacac
ggaatgtgggcttctacaatgagaataatggatccggtacaagggactacatttaaaatg
aaaagattcgaacaaaatgaagctgcaatgtgtatatctttggtcaagtttaacggacaa
cctgaacaccagtggtttttgatagtcggcgtcgccaaggatttacagctcaatcctagg
ttatgtatttcgggatatatagatacctataaagtggagatgtcttgtcgcgagttagaa
ctaatacatcgtacaccagttgaagaagttccttatgccgtttgttcgtataatggtcgg
ttgttggccggggtcggtcgattgttgaggttatacgattatggaaaaaagaagttattg
cgcaaatgtgagaataagcacattccaaatctcatcgtcaatattcaggcgatgggtcgg
cgaatttttgtcgccgatgttcaagaatctatctacatggttcgttacaaaaagcacgaa
aatcagctgatcatattcgcggatgacacacatccacgttggataacctgcacctcagtc
cttgactatgacaccgtcgcaacggcggacaagtttggtaacattggcattgtacgactt
ccccccaacacaacagatgatgtggacgaggatccaacgggaaacaaaagcttgtgggat
cgaggtctcttaaatggagcatctcaaaaggctgatacaatagcaacattccatgtgggc
gaaactgtcacttggttacagaaggctaccttgattcctggtggctgggaatctctaatt
tacacgaccgtttccggctccgtcggcgttttggtaccatttacttcccacgaagatcac
gacttctttcagcatcttgagatgcacatgcgcagtgagaattcaccgttgtgtgggcgg
gatcacttgtcatttagaagctattattatccagtgaagaacgtaattgatggagactta
tgtgaacaatataattcacttgaaccaagcaagcaaaaaagtattgctatcgatcttgaa
cgtacacctgcagaagtttccaagaaacttgaggacattcgaactcgatatgcgttttaa
DBGET
integrated database retrieval system
