Photinus pyralis (common eastern firefly): 116180368
Help
Entry
116180368 CDS
T07438
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116180368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116180368
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116180368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
UBA_RAD5A
F420_ligase
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
116180368
NCBI-ProteinID:
XP_031356183
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MSRHRNIRSINVNEEYEGYDDVYGHSVEDDYCVSPSEAAFVYDREGSKSKQKISAFFQSV
TEENEEPESREANLSEIDKARLESCIEQINQVLGCGISRQELINIILLYNFNVEKAINFI
LGCPQYKHVTEKKAAAIPKDVDSSNIKVVTPGPKTTNVTKGFDLVQKEVTRLNVTPRSQS
PASGRVTPVNAPDQNDETKGAKQKDSKLDANEQYKKERGGAKENLYMVVIGHVDAGKSTL
MGHLLCALGQVNQKTMHKYEQESRKVGKQSFMYAWVLDETGEERNRGITMDVGRSQFETE
TKLVTLLDAPGHKDFIPNMISGAGQADVALLVVDATRGEFETGFDFGGQTREHALLVRSL
GVGQLAVAINKLDTVMWSQERFNEIVQKLKVFLKHAGFKESDVAFVPCSGLTGQNLIRKP
TESELLQWYSGPCLLDVIDNFRTPERPVAKPFRFSINDVFKSTGSNFCVSGRVETGTLCL
GERVLVCPSRELATVKGLSIEEVSQQTVFAGDQVSVTLSGIDIQNVSIGYILCLPQNPVQ
IASNFQARIVVFNVTVPITKGYSVVMHHQSLVEPVIVCKLINQLHKSTGEIMNKHPRCLS
NNSSATVEIKSSRPLAIELYSECKELGRIMLRVGGVTIAAGLITKIIL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgacatcgtaatatacgttccataaacgttaacgaagagtacgagggatacgat
gatgtttatgggcattcagtggaagacgactattgcgtgtcgccaagcgaggcagctttc
gtgtacgatcgagaaggttccaaaagcaagcagaagatcagcgcgttctttcagtctgtt
accgaagagaacgaagagccggaatctagagaagcgaatttgtcggagatcgacaaggct
cgtctagagtcctgcattgaacaaatcaatcaagtcttaggctgcggaatatctcgccag
gagctgatcaacataatcttgttgtacaattttaacgtcgagaaggcaattaatttcatt
ttgggttgtccgcagtataagcacgtcaccgagaaaaaagcagcagccataccaaaagat
gtagattcgtccaatattaaagtggtcacgccgggacccaaaaccacgaacgtaacgaaa
ggttttgacttggtccaaaaagaggtgacacgattaaacgtaactcccaggtcgcaatcg
cccgcttcgggaagagtgacgccggtgaacgcgccggaccaaaatgacgaaaccaaaggc
gcgaagcagaaggacagcaagttggacgcgaacgagcagtacaaaaaggaacggggaggc
gccaaggaaaacctgtacatggtagtaataggacacgtcgatgcgggcaaatcgacgcta
atgggacacctgctgtgcgctttaggccaggtaaaccaaaaaactatgcacaagtacgag
caagagagtcgaaaggtcggaaagcagagtttcatgtacgcgtgggttttggacgaaact
ggcgaggagaggaatcgtggtattactatggacgtggggcgttcgcagttcgaaaccgag
acaaaattggtaactttattagatgcacccggtcacaaggatttcataccgaacatgatt
tcgggagcaggtcaggcggacgtcgccctactagtcgtcgacgcaactcgaggcgagttc
gagaccggtttcgatttcggcggtcagacgcgcgagcacgctctacttgtacgttcccta
ggtgtggggcagttggccgtcgccataaacaagttggatacggtcatgtggtcgcaggag
cggtttaacgaaattgtccaaaaacttaaagtgtttctcaaacacgccggtttcaaggag
agcgacgttgcgtttgtaccgtgcagcggtctcactggtcaaaacttgatcaggaagcct
acggaaagcgagctgttgcagtggtactccggcccgtgcttactcgacgtgatagataac
tttagaacgccagagcggccagtggcgaaaccgtttcgattttcgatcaatgacgttttt
aagagtactggatcgaacttttgcgtatccggacgcgtcgaaactggcaccttgtgcttg
ggcgaacgcgtgctggtatgtccgagcagggagctggcaacggttaaaggattatcgatc
gaagaagtcagccaacagaccgtgtttgccggtgatcaggtgtcggtgaccttgtccgga
attgatattcaaaatgtcagtatagggtacatactttgccttcctcagaatccggtgcag
attgcctctaactttcaagctcgtattgtggtctttaacgttactgttcccatcaccaaa
ggatactcggttgtcatgcaccatcaaagcctagtcgaaccggttattgtttgtaaatta
atcaaccaattgcacaaaagcaccggagaaattatgaacaaacatccgcgctgtttgagc
aacaattcgagcgctaccgtagaaataaagtcgtccagacctttggcgattgagctgtat
agcgagtgcaaagagttaggtaggattatgttacgagttggcggtgttaccattgcggcc
ggtttaattacgaagattatcttataa
DBGET
integrated database retrieval system
