Photinus pyralis (common eastern firefly): 116180426
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Entry
116180426 CDS
T07438
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03013
Nucleocytoplasmic transport
ppyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116180426
03015 mRNA surveillance pathway
116180426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116180426
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116180426
mRNA cycle factors
P-body specific factors
116180426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
rhaM
Motif
Other DBs
NCBI-GeneID:
116180426
NCBI-ProteinID:
XP_031356257
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MTVSESSEKALENEKLEEEEKAFVLTYIKEAQERLQLKTDMRTSNQAAPSSRPSEAHFSK
LDSNFKKNTAFVKKIKSFTCSQLESYLKDMSSLNLTKYISEIAAAIVDAKLKMTDIPAAL
KLCSILHQQYAEFSQHLFENWQKALSLKVGDKIANPSKLRVDLRFYAELVSVALFTNKNA
FTLLGNILTILINMDKEDHFNISIILTFCKHCGDDYAGLVSRKVKEYAVKYNFEIPKSSF
LQPEKQQNVRTLLKDYYTSICKHLLKDHKEMREFEKQNRRILNSKGELSQERKEKLESLQ
VMFEKLHTAAQSFADILEEDLPALPADPVPKEDETMIVTGTGLDPEDAASVANMESLWGD
IETQKFYCELPELQVFLPTSYLNKDKDKVEPEETVTEETLDSELPAEELDDDCKPEEPLE
EDAEESVSTTVSNKIIFEAFVNNLPNCVNRELIDNAAIDFLVTLNNKHNRRKLVRALFGV
NRTRLDLLPFYGRFVAIIYPAVPEVANELFLMLRQDFKYHVRKKDQINIESKIKVARYIG
ELVKFKMYSKMEALYCVKILLHDFSHHNIEMACNLLEVCGRFLYCCPESHQRTKVYLEQM
MRKKAVLALDSRYVTQIENAYYYVNPPDVGPTIKKERPVMHQFIRKLLYQDLQKNNSDKI
MRLIRKLDWNSEEIASYAIKCLIGAHNIKYLNIRCLANLLSGLVAYQEEVGTRVVDGVLE
DIRLGMEVNLPKFNQRRVAQIKYLGEMYNYRMVESGDIFKVLYSLITFGVTMDHSIPSPL
DPSTHLFRIRLVCVLLETCGTYFSSGSSKKRLDYYLVFFQAYYWFKRSYVVDFPPPLEHL
VKDTLQILRPKLKVCQSYEEAIAEVNNVRSSLGIENLLEVKERGDGELEAIAETDNEDQA
DDEISEGLTGPITDDTGTEDETVDHTRDSDDEGDRTDTEQESTSESHAIPSAPRKVECAE
DEEFLSALDKMVSENIQDRMREPIKLSNVDISVPVVVKSNKKTYDQLQDSNNPDQGTMGF
VLMVRKGNKQQYKTFHADINSELAQNLRDQELVQREEKERVKRLTLNITERFEEEDYQEM
LQQQSKPSSQNLNRERKKYQHPKGAPDADLIFGPKRVR
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactgtttcagaatcctctgaaaaagctttggaaaatgaaaaactggaagaggaagaa
aaagcctttgtgctcacctacataaaggaggcgcaagaacgtctgcaattaaaaacagac
atgcgaacctctaaccaagctgcaccatcctcgaggccgagcgaagctcacttctccaaa
ttggactcgaactttaaaaaaaacaccgccttcgtcaaaaagatcaagagcttcacgtgc
tcgcagctggagtcctacctaaaagacatgtcctcgttgaacctgacgaaatacatttcc
gaaatcgcggcggcaatagtggacgccaagcttaaaatgaccgacattccggccgcgctc
aaactgtgcagcatcctgcaccagcagtacgccgagttttcccagcacctctttgaaaac
tggcagaaggcgctgtcgcttaaagtcggcgataaaatagcgaatccgagcaagctgcgc
gtcgacttgcgattttacgccgagctggtcagtgtggcgctattcactaataaaaacgca
tttactctgctcgggaatattctaacgatactgattaatatggacaaagaagatcacttt
aacatatcgattattctcaccttttgcaagcactgtggcgatgattacgcaggcttggtg
tcgaggaaagtgaaggagtacgccgtgaagtataacttcgagataccgaagagttcgttc
ttacagcccgagaagcagcaaaacgtgcgtacgctgctcaaagattactacacgtcgatt
tgcaagcatctactgaaggatcacaaggagatgcgcgaattcgaaaagcagaatcgacgc
atactaaactcgaaaggcgaactgagccaggagcgcaaggagaagctcgagtcgctgcag
gtgatgttcgagaagctccacacggccgcgcagagtttcgccgacatcctggaggaggat
ctgccggcgcttcccgccgatcccgttccgaaagaggacgagacgatgatcgtgaccggt
accgggttggatccggaggacgcggcgtctgtcgcgaacatggagagcctgtggggggac
atcgagactcagaagttctactgcgagctgcccgagctgcaggttttcttgccgacgtcg
tacctgaacaaggataaggataaagtcgaaccggaggagacggtcactgaggaaactctc
gactccgagttgccggcggaggaacttgacgatgattgtaaaccggaagagcctctagaa
gaagacgccgaagagtccgtctcgacgaccgtgagtaacaagatcatcttcgaggcgttc
gttaacaatctgccgaactgcgtcaatcgcgaactgatcgataacgcggccatcgacttt
ttggtcacgctaaacaacaagcacaaccgtcgaaagttggtgcgcgcccttttcggcgtg
aatcgcactcgcctagatctattgcccttctacgggcggttcgtcgcgatcatttatccg
gcggttcccgaagtcgcgaacgagctgtttctcatgctgcgtcaagattttaagtatcac
gtccggaaaaaggaccaaatcaacatcgagtcgaagataaaggtggcgcgatacatcggc
gaattggtcaagtttaaaatgtactcgaaaatggaggcgctgtactgcgtcaaaatactg
ctgcacgacttctcccatcacaacatcgaaatggcgtgcaacctgctggaggtttgcggc
agattcttgtactgctgcccggagtcgcaccaacgaaccaaagtctacttggagcaaatg
atgaggaaaaaggcagtgctcgcgttggactcccggtacgtgacgcaaatcgaaaacgcc
tactactacgtcaacccgcccgacgtaggccccacgattaaaaaggaacggcccgtcatg
caccagttcattcgaaagttactctatcaggatttgcagaagaataatagcgacaaaatt
atgagacttatcagaaaattggactggaatagtgaggagattgcttcgtacgcgattaaa
tgcttgattggggcgcacaatatcaaatatctcaatatcagatgtctagcgaatctcctt
tcgggcctggtcgcctaccaggaggaggtcggtacgcgagtcgtggacggcgttctcgag
gacattcggctcggcatggaggtgaacttgccgaagttcaaccagcggcgcgtcgcccaa
ataaaatacctgggcgagatgtacaattacagaatggtcgagagcggcgacatctttaag
gtgctgtactcgctgatcacgttcggggtcacgatggatcactcgataccgtcgccgttg
gatccgtccacgcacttgtttcgcattaggctggtctgcgttttgttggagacgtgcggg
acctacttcagcagcgggagcagtaaaaagcgtttggactactacctggtgttcttccaa
gcgtactattggtttaagcggtcgtacgtcgtcgacttcccaccgccgttggagcacctg
gtcaaagatacgcttcagatacttaggccgaagttgaaagtgtgccagagctatgaggag
gcgatcgcggaagtaaataatgtaagaagtagtcttgggatagaaaacctgctcgaggtg
aaggagaggggcgatggcgaattggaggctattgccgaaactgacaacgaagatcaggca
gacgacgagatctcggagggtttaacgggaccgatcaccgacgataccggaaccgaagat
gaaaccgttgatcacactcgcgattctgatgatgagggcgatcgcacagacactgagcaa
gagtcaacatccgagtcacacgccatacctagcgcgccccgtaaagtcgaatgcgcagag
gacgaagagtttctaagcgcactcgacaaaatggtctctgaaaacattcaagatcgcatg
cgcgaaccaataaagctatccaatgtggacatttccgtaccggtcgtggtcaagtcgaac
aaaaagacctacgatcaattacaggattccaacaacccggaccagggaactatgggattc
gttctgatggtccgcaagggcaacaagcagcagtacaaaacgttccacgccgacatcaac
tccgagttggcgcagaacttgcgcgaccaagagctcgtccagcgcgaggagaaggagcgc
gtcaaacgcctgacgctcaacatcaccgaacgcttcgaggaggaggactatcaggagatg
ctgcagcagcaaagcaagccgtccagtcaaaatttgaatcgcgagcgcaaaaagtatcag
catccgaagggcgcgcccgacgccgacctaattttcggtccgaaacgtgtccgttga
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