Photinus pyralis (common eastern firefly): 116180489
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Entry
116180489 CDS
T07438
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116180489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116180489
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116180489
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116180489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PulA_N1
Motif
Other DBs
NCBI-GeneID:
116180489
NCBI-ProteinID:
XP_031356352
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLMEYRKLIETQMERFKIVERETKTKAYSKEGLGAAQKLDPAQKE
REEMSSWLVGCIDQLNIQIDSFECEIESLLANKKKKLDKDKQERMDELKAKLEKHRFHIR
KLETILRMLDNMSVEVSQIKQIKDDVEYYIDSSQDPDFEENEYIYDDIIGLDEVELSGVG
LPSSATTDSNETGGTPTSIISGSSPIASPLLTNPPYNHSSDSSNEEKKNQFKDVPKPVKP
TAVRATSTNLNSSSNSTLNSSGNSATSTPSSKPTLVSSTPSKPSSVRECSPVPHVPTTGN
FAAVAANNILKSIACNNESVPTSVISTSNQSVISTSTVTNTIHHTVAAQAGNTHQANHTA
QNLSITLQKNNFAEQITNNCVSPVSSVSSRTSPMIDITLQALNQPIMNGPTTDSKIADGM
SSLKTIAQQVIDRAGLDGNQVMLDTNKVQNNSKSEAQIPPLLGVAPLGAVPLQKEHQAQF
QMMESAFFHMPHPSDSEKLRTYLPRSPYHTPPYYLQSPLPHSDTLEFYQRLATETLFFVF
YYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINEEYEQGTYIYFDYEKWGQR
KKEGFTFEYKYLEDRDLN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgacaagaaagttgcaaggtgaaatcgataggtgtttaaaaaaggtaacggaa
ggagtcgaaacgttcgaagatatctggcagaaggtgcacaatgcgacgaacagcaaccag
aaggagaagtacgaggcggatctcaaaaaggaaatcaagaagttacagaggctacgcgac
caaattaaaagttggatcgcgtcgggcgagattaaggacaaaagcaccttgatggaatat
cggaagctaatcgaaacgcaaatggaaaggtttaaaatagtggagagggagactaagaca
aaagcgtattccaaagaaggtctgggggcggcgcagaaactggatccggcgcagaaggag
agagaggagatgtcgagctggttggtcgggtgcatcgatcagttaaacattcagatagac
tcgtttgaatgcgagattgaatctttactggcgaataagaagaaaaagttagacaaggac
aagcaggaacggatggacgagctgaaggcgaagctcgaaaagcacaggtttcacattcgc
aagttggagacgatactccggatgctggacaacatgtcggtcgaagtgtcacagatcaaa
caaataaaagacgacgtcgagtattacatcgactcctcgcaggatcccgatttcgaggag
aacgagtacatatacgacgacataatcggtttggacgaggtcgaattgtcgggcgtcggt
ctgccgtcgtcggcgacgaccgacagcaacgagacgggaggaacgccgacgtcgattatc
tcgggatcgtcgccgatagcgtcgccgttactgacgaatccgccgtacaatcattccagc
gacagctcgaacgaggagaagaagaatcagttcaaggacgtgccgaagccggtcaagccg
accgcggtgcgggcgacgagcacgaacctgaacagtagcagcaattcgacgttaaattcg
agcgggaatagcgcgacgtcgacgcctagcagtaaacctacgttagtaagcagcacgcct
agtaaaccgtcgtcggttcgagagtgttcgccggttcctcacgtacccacaacgggaaat
ttcgccgccgtcgccgccaataatattttaaaatctatcgcatgtaataacgaaagtgtt
ccgacttctgtgataagtacaagtaatcaatcggtgatctcgacgtctacggttacgaat
actatccaccatactgtggctgctcaggctggtaatacgcatcaagcgaatcacactgct
caaaacttatccatcaccttacaaaagaacaactttgcggaacaaatcacgaacaactgc
gtcagtcccgtgtctagcgtaagcagtcgaacgtcgccaatgatcgacataaccttacag
gcgttaaaccaaccgataatgaacggaccgacgacggacagcaagattgcagatggcatg
tcatcgttgaaaacgatcgcgcagcaagtgatcgaccgtgccggtctggatgggaatcaa
gtaatgttagacaccaataaagttcaaaataatagtaaatcggaagcccaaatacctcca
cttttaggagtggcacctctcggcgcggtgccactgcagaaagagcaccaggcgcaattc
caaatgatggaatcggccttctttcacatgccccacccgtccgactccgaaaagctccgc
acctacctgccccgaagtccgtaccacacgcccccctactacttacaaagtccgttaccc
cactcggacacgctagaattctaccagaggcttgcgacggaaacgcttttcttcgtcttt
tactacatggaagggaccaaggcccaatatttggcggcgaaagctttaaaaaaacaaagc
tggaggtttcacaccaagtacatgatgtggtttcagaggcacgaagagccgaagatcatc
aacgaagagtacgagcaggggacgtatatttatttcgattacgaaaagtggggtcaacga
aaaaaggaagggtttacattcgagtataagtacttagaagatcgcgacctgaactga
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