KEGG   Photinus pyralis (common eastern firefly): 116180550
Entry
116180550         CDS       T07438                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
ppyr  Photinus pyralis (common eastern firefly)
Pathway
ppyr03013  Nucleocytoplasmic transport
ppyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116180550
  09122 Translation
   03013 Nucleocytoplasmic transport
    116180550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppyr03019]
    116180550
   03041 Spliceosome [BR:ppyr03041]
    116180550
Messenger RNA biogenesis [BR:ppyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     116180550
Spliceosome [BR:ppyr03041]
 Complex C
  Other components
   EJC/TREX
    116180550
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    116180550
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd eIF2A Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N Beta-prop_Vps41 Tricorn_2nd Beta-prop_HPS5 DSE1_N RMC1_N Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th NBCH_WD40 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_EIPR1 PAC11 TRM82_WD Beta-prop_DCAF12 ASA1 Peptidase_S9_N PD40 WD_LRWD1 Beta-prop_WDR75_1st Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 116180550
NCBI-ProteinID: XP_031356459
LinkDB
Position
Unknown
AA seq 320 aa
MYAEQIKQLQSHFKSHSKSKEYTGHTAKVHSVGWSCDGKRLASGSYDKSVSIYTLDKDLL
NKETTFKGHGGSVDQLCWHKTHSDLLSTASGDKSVRIWDIRVQKCVATINTKGENINITW
APDGETIAVGNKEDLVTFVDARTHKIKSEEQYNFEVNEISWNNTSEFFYLTNGQGCIHIL
SYPDLEVQHVLKAHPATCICIEFDPTGKYFATGSADALVSLWDVDELACLRVFTRMEWPV
RTISFSHDGQLLASASEDLLIDIAFVESGDKIADITVEAATFTVAWHPSRHLLAYACDDK
DTYDRKRDAGNLKVWGFQVD
NT seq 963 nt   +upstreamnt  +downstreamnt
atgtacgccgaacaaataaagcagttacaaagtcattttaaatcgcacagtaaatctaag
gaatataccgggcacaccgccaaagttcactcggtaggctggagctgtgatggtaaacga
ctggcttcgggctcctacgataagtcagtttcgatttacaccttagacaaagacctactt
aacaaggaaacaacatttaagggacacggaggctcggtcgaccagctttgctggcacaag
acgcattcggaccttctcagtacggcgagcggcgataaatcggttcgaatttgggacata
cgagtgcaaaaatgcgtggccaccatcaatacgaaaggcgagaatataaatataacgtgg
gcgccggacggcgagacaatcgcagttggtaataaagaggacttggtcaccttcgttgat
gcgaggactcacaaaattaagagcgaggagcagtacaattttgaggttaacgagatctcc
tggaacaacacaagcgagttcttctacttgactaacggtcagggatgcattcacattttg
agttatcccgatttggaagtacagcacgttttaaaagcgcaccctgccacttgtatttgc
atagagtttgatcccacgggcaaatacttcgcgaccggcagtgccgatgccttagtctcg
ctgtgggatgtcgacgaattggcctgcttacgggtttttaccagaatggagtggcctgta
cgtaccatatccttcagtcacgacggacagctgctcgcgtctgcttcagaggatttatta
attgacatagcgttcgtggaaagcggtgataagattgccgatatcacggtggaagctgcg
acgtttacagtagcttggcatccatctcgtcatctccttgcgtacgcgtgtgacgataaa
gacacttatgatcgcaaacgtgatgcgggcaatttgaaagtgtggggttttcaagtggac
tag

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