Photinus pyralis (common eastern firefly): 116181713
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Entry
116181713 CDS
T07438
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116181713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppyr03021
]
116181713
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116181713
Transcription machinery [BR:
ppyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116181713
RNA polymerase I system
116181713
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
116181713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
CTD
DUF3912
DUF615
Motif
Other DBs
NCBI-GeneID:
116181713
NCBI-ProteinID:
XP_031357984
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MSDSEASNFSDAEASGSERGSPVSNRSRQSSVESRGSRRSVSRSRSRSGSRSGSEAREAS
DGERVEEEQEPEGDSLHDSEEYDSEEDESDSGHRRKRKKKDRYGGFIIDEAEVDDEVEDE
DEWEDGAQEIGIVGNEVDELGPTAREIEGRRRGTNLWDSQKEHEIEEYLRKKYADDGAAA
RHFGDGGEEMSDEITQQTLLPGVKDPNLWMVKCRIGEEKATVLLLMRKFLAYQNTNEPLQ
IKSVVAPEGVKGYIYIEAYKQPHVKASIENVGNLRMGLWKQQMVPIKEMTDVLRVVKEQT
GLKSKQWVRLKRGLYKDDIAQVDYFDMAQNQVHLKLLPRIDYTRLRGALRTTQSESDAEK
RKKKRRPPSKPFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFTLSAVIVDGVKP
TLAELERFEEQPEGIDLELPTEKEDKALTHTFSAGDNVEVCEGELINLRGRIVTIDGNMI
TVMPKHDDLKDALIFQASELKKYFSMGDHVKVLSGRYEGDTGLIVRVENNRVVLISDLTM
HEMEILPKDLQLCTDMASGVDSLGKFEWGDLVNLDSETVGVIVRLERENFHILNMHGKVV
ECRPSSLQKRRLNRFTAALDSFRNNLHRKDMVKVIDGPHSGFAGEIKHLYRNFAFLHSLE
YLQNGGIFVCKTKHLQLAGGNKTAPAMEVTTNMEFMSPRRSSPMHPSGGGGGGGGGGFGT
PRGGGHGRVTRQRDLIGSTIKITRGPYKGNIGIVKDATQSTARIELHTSCQTISVDKNHI
ADVGTPTRDPGSTSYGRTPAYSGSQTPLYRDSGNKTPMADAGSRTPLHYGSMTPLHDGSR
TPNAHSEWDPTASNTYPSPGYNPSTPGYQMNGPYTPQTPGTMFNESGYSPYQPSPGYQSV
VSTPSPATGYSQSPSSNNPYNTPSTGYSPNMPYNPQTPGANLEVLPMTDWHTIDIEVRIR
DSHDDQGLVGQTGVIRSISGSMCSVFLPEEDRVVTIMCDHLDPVQPQRGDIFKVIIGEER
EAIGELLSFDSQEGIVKFKNKITLLPLSHLCKMRKPDD
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcagaagcgagcaatttctcggacgccgaagcctcgggatcggagaggggc
tcgcccgtatcgaaccgctccaggcagagcagcgtcgagtcccgtggctcccgtcgttcc
gtctcccggtcgcggtcccgttcgggcagtcgctctggttcggaggcacgcgaggcatcg
gacggggaacgagtcgaagaagagcaggaacccgaaggcgactcgttacacgacagcgaa
gaatatgacagtgaggaggacgaaagtgattcgggccaccggcgcaaacgtaagaagaag
gatcgttacggtggttttattatcgacgaggctgaggtcgacgacgaggtggaagacgag
gacgaatgggaggatggcgctcaagagattggtattgtcggtaacgaggtggacgagctg
gggccgacggctcgcgaaatcgaagggcgacgacgcggcactaatctctgggattcacag
aaagagcacgaaatcgaggagtacttgcgtaagaagtacgccgatgacggtgcggccgcc
cgacacttcggggatggcggggaggagatgtccgacgaaatcacgcaacagaccctgctc
cccggcgtaaaagatccgaatttgtggatggtgaaatgccggatcggcgaggagaaggcg
accgttctgctgctgatgcgaaaattcctcgcgtatcagaacacgaacgaacctctgcaa
atcaagtcggtcgtcgcgcccgagggggtcaaggggtacatttacatcgaggcgtacaag
cagccgcacgtcaaggcgtcgatcgagaacgtcggcaatttacgaatgggactgtggaag
cagcagatggtgccgatcaaggagatgaccgacgtgctgcgcgtcgttaaggaacagacg
ggcctcaagtcgaagcagtgggtgcggctcaagcgcggcctgtacaaggacgacatcgcg
caggtcgactatttcgatatggcccagaatcaggtgcatctcaagctgttgccgaggatc
gactacactcggctgcggggcgccttacgtactacgcaatcggagtccgatgcggagaaa
cgcaagaagaagaggcgtccccctagtaaacctttcgatcctgaagctataagggcaatc
ggtggtgaagtaacttcagacggtgactttttaatattcgagggaaatcgttactctcgc
aagggcttcctgtacaagaactttacgttgagcgccgtaatcgtggacggcgtaaagccg
acgttggccgagctggaacgcttcgaggagcagcccgagggaatcgacttggaacttccg
accgagaaggaagacaaggcgttaacgcacaccttcagcgctggcgataacgtcgaggtg
tgcgagggcgagctgattaacttgcgggggcgcatcgtgacgatcgacggaaatatgatc
accgttatgccgaagcacgacgatctcaaggacgccctcatcttccaggcgtccgaattg
aaaaagtacttcagcatgggcgaccacgtcaaagtgctgtcggggcgctacgagggcgac
accgggctgatagtgcgggtcgagaataatcgcgtcgtcttgatctccgacctgaccatg
cacgaaatggaaatcctcccgaaagatctgcagctgtgtacggatatggcgagcggcgtc
gactccttgggcaagttcgaatggggagatctcgtcaatttggattcggagactgtcggc
gtgatcgtcaggttggaacgcgagaatttccacattttaaatatgcacgggaaggtggtc
gagtgtcggcccagttccctgcagaagcggcggctgaatcgtttcacggccgccttggat
tcgttccgaaacaatttacacaggaaagatatggtcaaggtcatcgacgggccccattcg
ggcttcgccggcgaaattaagcacctctacaggaatttcgcgttcttacattccttggag
tacttgcagaacggtggaattttcgtttgcaagaccaagcacttgcaattggccggcggc
aacaaaaccgcgcccgccatggaggtgacgacgaacatggagttcatgtcgcctcgccgc
agctcgcccatgcatccttccgggggcgggggcggaggcggcggcggaggtttcggtact
ccgagaggtgggggccacggccgtgtcacccgccagcgtgatctcatcggatcgaccatc
aaaatcactcgaggcccttacaagggtaacatcggcatcgtcaaggacgcgacgcagtcc
accgcgagaatcgaacttcacacctcctgccagacgatatcggtcgacaagaaccatatt
gccgacgtcggaactccgactcgcgatcccggcagcacgagctacggcagaacgcccgcg
tactcgggcagccaaactccgctctacagagacagcggcaataagactccgatggcggac
gccggctctcgtactcccctgcactacggttcgatgacgccgttgcacgacggctcgcgc
actcccaacgctcactccgagtgggaccccaccgcgtccaacacgtacccgtcgcccggc
tacaacccgagcacgcccggctatcaaatgaacggaccgtacacgccccagacgcccgga
acgatgtttaacgaaagcggatacagcccgtaccaacccagtcccggctaccaaagcgtg
gtgtcgaccccgagcccggcgaccggctacagccaatcgccgtcaagcaacaacccgtac
aacacccccagcaccggttacagcccgaacatgccatacaacccccaaacaccgggcgcg
aacctggaggtcctaccgatgaccgattggcacacaatcgacatcgaggtgcgcatacgc
gacagtcacgacgaccaaggcctcgtcggccagaccggcgtcatacgtagcatctcgggc
tcaatgtgctcggtctttctgcccgaagaagaccgcgtcgtcaccataatgtgcgaccat
ctcgatcccgttcaacctcaacgcggcgacatatttaaggtgatcatcggcgaggaacgg
gaggcgatcggcgaactcctctccttcgactctcaggagggtatcgtcaagtttaaaaat
aagattactctgctgccgctgtcgcatctgtgcaagatgcgtaaaccggacgattag
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integrated database retrieval system
