Photinus pyralis (common eastern firefly): 116181778
Help
Entry
116181778 CDS
T07438
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03013
Nucleocytoplasmic transport
ppyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116181778
03015 mRNA surveillance pathway
116181778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116181778
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116181778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
116181778
NCBI-ProteinID:
XP_031358070
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MDNDHDVKKTSSGDNLTTNNQTVDMANSNEKGNNQNVDSEYESIYDSSNDQDDENVHEEE
GFESEGSVGLEREEGDGQESVANKKVDDDEDKKNPQYIPKRGTFYEHDDRTMEESNENRE
EEEKVEKQNKKIVWVEKKERWSHDRYNDNEQAPKSRSELVAIYGYDIRNEDGPPKARRRR
RYGRGPNKYTRTWEDEDAYKATKPVKPIKTKSKNREEYPPLSENNEEKRQSNITESSFQS
TERHDSNNEELEPPTENPKPSQTQPDQNVSSSDQTKVTPPNQRAGTGRVKTKSEIQRKDY
RGFTKSREFSNSNSKSEQAVSRAPKVEPRQDYKANEMENLEQDMNQINIQDHASKMSNKQ
QSNHRQNNVPPRLQAEQKGSSKRYSSLRQRSLPETATPNYSQAANYYPNEYTGTTPTAPP
PSLLPQPTTLHAPTQVTQIPPPPLATLPQPVSVTSNPILQAPPPFATTFPQPAAPFLSPP
VATPPFLPQQAPPLINYVQSQAQFPPQAAPYQGYQQFNAVNTADLYQCQGGTTYYSTQGQ
QLGQRMVPQKRPKAAIPIVAPPIPEPRGRGRSINNHMESPPLLESTVCETIISENCNYED
IVYVQQ
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgaccacgacgttaaaaaaacatcatctggagataacctaacaacaaataac
cagacagtagatatggctaatagtaacgagaaaggcaataatcagaatgtcgattccgaa
tacgaatcaatctatgattctagcaacgatcaagatgatgaaaacgtgcacgaggaggaa
ggcttcgaaagcgaaggcagcgtagggttagaaagggaagaaggcgatggacaggaaagt
gttgcaaataaaaaagtcgacgacgatgaagacaaaaagaatccacagtacatacctaag
aggggtacgttttatgaacatgacgatcgtacgatggaagagagtaacgaaaatcgagaa
gaagaggagaaagttgaaaagcaaaataaaaaaattgtatgggttgagaagaaggaacgg
tggtcacacgatcgatataatgataatgaacaggctccgaaatctcgatctgaattggtg
gcaatttacggttatgatatacgaaatgaggatgggcctccgaaggctaggaggcgtaga
agatatgggcgaggaccaaataagtacaccaggacgtgggaggacgaggacgcttataaa
gccacaaagcctgtaaaaccaatcaaaactaaaagcaaaaatagggaagaatatccacca
ttaagcgaaaataatgaagagaagagacaatctaatattacagaatcttcctttcaatca
actgaaagacatgattccaataatgaagaactggaaccgccaacagaaaatcctaaacct
tcacaaacacaacctgaccaaaatgtttcatctagtgatcaaactaaagtgacaccccca
aatcaaagagctggaactggccgggtaaaaactaaatcagaaattcagcgcaaagattac
aggggtttcacaaagtcgcgtgaatttagcaattccaattccaaatcggagcaggcagta
tcaagagcaccaaaagttgagcctcgccaagactataaagccaacgaaatggaaaatttg
gaacaagatatgaaccaaataaatattcaagatcatgcttccaagatgtctaacaagcag
cagagtaatcatcgccaaaataatgtacctcctcggttgcaagcagaacagaaaggttcc
tcgaaacgttatagttctttacgtcaacgttcattgccagaaacggctactcccaattat
agtcaagcagcaaattattatcctaatgaatacactggtactacacctacagctccccct
ccatctctattacctcaacccaccacattgcacgcacctactcaagtgactcaaataccc
ccacctcctttagctacactacctcaacccgtttccgtaacctcaaatccaattttgcaa
gcacctcctccatttgcaactacatttccacaaccggcagctccatttttatcaccaccc
gtcgctactccgccatttttgcctcagcaagcgccacctttaatcaattatgttcaaagt
caagcccagtttcctccgcaagcggctccttaccaagggtatcaacagtttaacgcagtg
aacacagctgatttatatcaatgccaaggaggaaccacgtattattccacacaaggtcaa
cagttaggtcaaaggatggtgccgcagaagcgtcctaaagctgcgattccaattgtagca
cctcccatacctgaacccagagggcggggtagatcgatcaataatcatatggaatcccca
ccccttttagaaagtacagtttgcgaaactataataagtgaaaattgtaattatgaggat
attgtgtatgttcaacaatga
DBGET
integrated database retrieval system
