Photinus pyralis (common eastern firefly): 116182476
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Entry
116182476 CDS
T07438
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03013
Nucleocytoplasmic transport
ppyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116182476
03015 mRNA surveillance pathway
116182476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116182476
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116182476
mRNA cycle factors
P-body specific factors
116182476
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
116182476
NCBI-ProteinID:
XP_031358873
UniProt:
A0A1Y1LDD1
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MAVSDGPNASCEDKTYKDIPKSKDKKEKPLTKVIVRRLPPSIDLQSFLMQVSPIPDYDYI
YIVRGDMSFGEHAFGRVYINFVQPTDIFMFKEKFDNYVFVDQKGHEYPAVVEFASFQKIP
RKRKPRLDPKVGSIESDPIYLEFVESLKEQPNQDIKPEFSYQFGNDTKEEISSTPLLDYI
KQRRIDKQRIREERREERKRKELERKKLREDERKRYEQKSPAKVASKPVGGNRSTKTALD
SLKEEEKHDAKIKEEDTPQLDKSAKEDSKGHFKLKPRFPTRSEKVDYHDKRSEYKNRRDD
YREKEFRSRRFEEYKNEPDFKAPRRTKKYSEKREERRNEARKAELKIVEEIVEKPEETDN
MPEGQVQAESTEGQNEEAGNVQTDDMEESSLPVEHKLENQSSTEFDDDVSLDKESKCKEH
DPRLQRRIRNKDRPTMAIYQPGMLSKRKTTDDDTAGPKE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccgatggacctaatgcatcttgtgaagacaaaacatacaaagatataccg
aaatctaaagacaaaaaagaaaaaccgttaacaaaagtcattgttagacgtttaccccct
tcaatcgacttacaatcgtttttaatgcaggtttctccaataccagattatgattacata
tacattgtcaggggggacatgagttttggcgaacacgcatttggaagagtttacataaac
tttgttcagccaactgatatatttatgtttaaggaaaagtttgataattacgtctttgta
gaccagaaaggacacgagtaccctgccgtcgtggaatttgcatctttccaaaagattccg
cgtaaacgcaaacctagacttgatccaaaagtggggagcattgaatcggatcctatctat
ttggaatttgtagagtcgcttaaggagcaacctaatcaagatattaaaccagagttttca
tatcagtttggcaatgatacaaaagaggaaatatcgagtacaccactactggactacatc
aaacaaaggcgtattgataaacaacgtataagagaggaacgtcgagaagaaagaaaacga
aaggagctggaaagaaaaaaattaagagaagatgaacgtaaaaggtacgaacagaaatct
cctgcaaaagttgccagtaagccggttggtggcaatcgttcaaccaaaacagctcttgat
agtttgaaagaggaggagaaacatgatgctaagataaaagaagaagatactccacagttg
gacaaaagtgccaaggaggactcgaagggacattttaaattaaaacctcgatttccaact
cgttcggaaaaggtagattatcatgataagagatcagaatataaaaaccgtagagatgat
tatagggaaaaagagttcagaagtcgcaggtttgaagagtataaaaatgaaccagacttc
aaggcacctcggcgaacaaagaaatatagtgaaaaacgagaggagaggaggaacgaggct
aggaaagctgagcttaagatcgtagaagaaattgttgagaagccagaagaaacagataat
atgcctgagggtcaagtgcaagctgaaagtaccgaagggcaaaatgaagaagcaggtaac
gtgcagactgacgacatggaagagagcagcttaccagttgaacacaaattggagaatcaa
tcttccactgaatttgatgatgatgttagtctggataaggaaagcaaatgcaaagagcat
gatccacgtttacaaagacgaattagaaataaagatcgtcctacaatggctatctatcag
ccaggcatgttatcaaaacgtaaaactactgatgatgataccgcaggtccaaaagagtga
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