Photinus pyralis (common eastern firefly): 116182832
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Entry
116182832 CDS
T07438
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116182832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyr03041
]
116182832
Spliceosome [BR:
ppyr03041
]
Complex B
Other components
Prp19-related factors
116182832
Complex C
116182832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_YTH1
RRM_occluded
zf-CCCH_4
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
116182832
NCBI-ProteinID:
XP_031359247
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MAMSKTTNTYNRQNWEDADFPILCQTCLGDNPYIRMTKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDSALKMRDDLPKSDVNKEYYIQN
MERELARAESGAVIGTRTGEPNDLLMRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYR
HEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRAAAMPALPPPEDKTITTLYIGNLGTL
NEQDIRDHFYQYGEIRSISLVPKQQCAFVQYTTRSAAENAAEKTFNKLILGGRRLTIKWG
RSQGRQGPTIGNPTAELFEPVPGLPGTLPELSNNFFNLEPGHIPLPNMPPPSSLMVPPMF
APPPMPPFFFTPTQASPFVPPVSSSLSTASSSTASNGDVSGKPTVHYPSQDPSRLGATQL
LADRQE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgtcaaagacaacaaatacgtacaacagacaaaattgggaggatgccgacttc
cccatactttgccaaacatgtttaggagacaatccgtatattagaatgacaaaagaaaaa
tacggcaaggaatgtaaaatttgtgcgagaccgtttacagtgtttcgttggtgtcccggt
gcgagaatgagatttaagaaaactgaaatatgtcaaacgtgtagcaagttgaagaacgtg
tgtcaaacttgcttattagacttggagtatggtctgccaattcaagtgcgggattctgct
ttgaagatgcgtgacgatttacctaaaagtgatgtcaataaggaatactatatccaaaat
atggaacgagaattggccagggcggaatctggtgctgttatcggtacacgtactggggag
cccaacgatttattgatgcgattggcgagaactgcgccttattataaaagaaataggccg
cacgtctgttccttttgggttaaaggtgaatgtcgacgaggagaagaatgcccctatcgc
cacgagaagcctaccgatccggatgacccattggcagatcagaacattaaagatcgttat
tatggcatcaatgatcctgtagcggataaacttctcaaacgggcagctgccatgcccgct
ttaccgcctccggaagataaaactattaccacattgtatattggtaatttgggaacgtta
aatgagcaagacataagggatcatttctatcaatatggtgaaatacgttcaatcagtctg
gtaccaaaacagcagtgcgcgttcgtacaatacactacaagatcagcagcagaaaatgcg
gcagaaaaaacatttaataaattaatcctgggcggtagaagactaacaattaagtggggt
cgttcgcaaggtagacagggacccacaattggcaatcccacagcagaactatttgaacca
gtacccggccttccaggaactcttccagagttgagcaacaactttttcaatttagaaccc
ggacacataccgctacctaacatgccgccaccgtcatcattaatggtacctcccatgttt
gcaccgccaccgatgcctcctttcttttttacgccaacacaagcatctccattcgttcca
ccagtgtcaagtagtcttagtacggctagtagtagtaccgcaagtaacggggacgttagc
ggaaaaccaactgtgcattatcctagtcaagacccttctagattaggcgcgacacaattg
ttagctgataggcaggaatag
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