Photinus pyralis (common eastern firefly): 116182953
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Entry
116182953 CDS
T07438
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116182953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyr03041
]
116182953
Spliceosome [BR:
ppyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116182953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EML
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WDR54
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR75_2nd
Nbas_N
Motif
Other DBs
NCBI-GeneID:
116182953
NCBI-ProteinID:
XP_031359379
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All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MSDDDEDVPYVKKTRTIHYGSLEDAEKARLEASSDDDNDDSKLSALQSAQIHISNEYMEL
EDSISKEKLALLEEFERRKKARSINVSTDDGEVKKNLRQLGEPVCLFGEGPADRRNRLRD
ILACLGEDIITRRDVDDEKKQLEISQETTWYHEGPESLRISRLWIAEYSLPRAKARLEEA
RLMRDLPNAARTAKRQEIQKKIQNLAIHSSQIGDTRPISSCMFSPNSQLLATGSWTGLCK
VWSIPNCELKQTLKGHNSNVGAIIFHPKATISQEENVCNMVSCAFDGSVKLWDFKSEEPI
ADIEGHMPYRVSKMGFHPSGRFLGTCCYDCSWRLWDLHQCTEVLHQEGHGKPVHCISFQI
DGSVCATGSLDAFGRVWDLRTGRCIMFMEGHLKGIMGIDFALNGYQLATSSEDNTCKIWD
LRKRSAVYTIPAHTNLVSDIKYQKEGDFLVTASFDTTVKLWTNRTWQPLKTLSGHDGKVM
CADMSPDNQFIVSASYDRTFKLWTAEDKCDNL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgacgacgaagatgttccgtacgttaaaaaaacgagaaccatccattacgga
tcgctggaggatgcagagaaagctagactggaggcctcttcggatgacgataatgatgat
tctaagctctccgcgcttcagagtgcacaaattcacatatccaatgagtatatggaattg
gaagactcgatatcgaaggagaaactagcattgcttgaggagttcgaaaggagaaaaaag
gcccggtctatcaatgtttcgaccgatgatggcgaagtgaaaaagaatttgcgacagtta
ggcgaacctgtgtgtctttttggagaaggacctgcagatagacgtaatcgattgagagat
atattagcttgtcttggagaagatataataacaaggcgagatgtagatgacgaaaaaaaa
caactagaaattagccaggaaacaacttggtaccacgaaggtccggaatcactgcgaata
tctcggttatggatagccgaatattctttaccgagagcgaaagcacggttggaagaagca
cggttgatgcgagatctacccaatgcagctagaactgctaaaagacaggagatacaaaag
aaaatacaaaatttagccatacatagcagccaaataggagatacgcgaccaatttcttct
tgcatgttcagtcccaactctcaactattggcaacaggatcttggactggattatgtaaa
gtgtggagtataccaaattgcgaattaaaacaaactttaaagggccacaattctaacgtg
ggtgcaattatatttcatccaaaggcaacaataagtcaagaagaaaacgtttgcaacatg
gtgtcctgcgcttttgatggttctgtaaaactatgggatttcaaaagtgaagaaccaata
gcagatattgaaggtcacatgccgtatcgtgtttctaagatgggttttcacccatcggga
cgatttctaggcacgtgttgttatgactgctcatggcggctatgggatttacaccaatgc
acagaagtgttgcatcaagaaggccatgggaaaccagtacactgtattagtttccaaata
gatggttcggtttgtgctacaggaagtttggatgcatttggaagagtttgggacttacga
acagggcgatgcattatgttcatggagggtcacttgaaaggaattatggggatagatttt
gcacttaatggctaccaattggcaacatctagtgaagataatacatgcaagatatgggac
ttgagaaaacgttcagctgtttataccattcctgcgcatactaatttagtatcggacatt
aaatatcaaaaggagggagattttttggtcaccgcgtcattcgacactactgtaaagttg
tggacaaatcgtacgtggcaacccttaaagactttgtctgggcatgatgggaaagttatg
tgcgcagatatgtctccagataatcaatttattgtcagtgcttcttatgataggacattt
aagttatggactgcagaagataaatgtgacaatttgtaa
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