Pseudomonas poae: H045_01725
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Entry
H045_01725 CDS
T02456
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ppz
Pseudomonas poae
Pathway
ppz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H045_01725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppz03019
]
H045_01725
Enzymes [BR:
ppz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H045_01725
Messenger RNA biogenesis [BR:
ppz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H045_01725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AGE24421
LinkDB
All DBs
Position
complement(373747..375186)
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AA seq
479 aa
AA seq
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MLKALKKMFGKSEAEPLAPVASAPAPAAPRRTEAQQPARSAPAARPPEPAAPVEPVAAAR
PPRERAPKPKPVVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIQDLGFPYCTPIQAQV
LGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQ
IAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLLDFNQRGDVHLDM
VEVMVLDEADRMLDMGFIPQVRQIIRQTPPKNERQTLLFSATFTEDVMNLAKQWTTDPSI
VEIEALNVASENVEQHIYAVAGADKYKLLYNLINDNGWERVMVFANRKDEVRRIEERLVR
DGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEVPD
DYVHRIGRTGRAGAAGVSISFAGEDDSYQLPSIETLLGRKISCETPSTHLLRAVERKRP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaagcactcaagaagatgttcggcaaaagcgaggctgagccgctcgcgccagtt
gccagtgcgcctgcccctgccgccccccgccgcaccgaggctcagcagccagcgcgtagc
gcaccggctgcccggccgcctgaacctgccgcaccggtggaacccgtcgccgctgccagg
ccacctcgcgaacgtgcgcccaagcccaaaccggtagtgatcccctggaaactcgaagac
ttcgtcgtcgagccccaggaaggcaagacccgcttccacgacttcaagctcgctccggaa
ctgatgcacgccatccaggacctgggcttcccgtactgcacgccgatccaggcacaagtg
ctgggctttaccctcgccggcaaggacgccataggccgcgcccagacaggcaccggcaag
accgccgcgttcctcatttcgatcatcacccagctgttgcaaacgccgccgcccaaagaa
cgctacatgggtgaaccgcgcgcgctgatcatcgcccccacccgcgagctggtggtgcag
atcgccaaggacgccgccgacctgaccaagtacaccggcctcaatgtcatgacgttcgtg
ggcggcatggacttcgacaagcagctcaagcacctcgaagcgcgccactgcgacatcctt
gtggccactccaggacgcctgctcgacttcaaccagcgcggcgacgtgcacctggacatg
gtcgaagtgatggtgctggacgaagccgaccgtatgctcgacatgggcttcatcccgcaa
gtgcggcagatcattcgccagactccgccgaaaaacgagcgccagaccctgctgttctcc
gcgaccttcaccgaagacgtgatgaacctcgccaagcagtggaccactgacccgtccatc
gtcgagatcgaggcgctgaacgtcgccagcgaaaacgtcgagcagcacatctacgccgtg
gccggtgccgacaagtacaagctgctctacaacctgatcaacgacaacggttgggagcgc
gtgatggtgttcgccaaccgcaaggatgaagtgcgccgcatcgaagagcgcctggtgcgc
gatggcgtcaacgccgcgcaactgtcgggcgacgtgccacaacacaagcgcatcaagacc
ctggaaggcttccgcgaaggcaagattcgcgtgctggtggccaccgatgtggccgggcgc
gggattcacatcgacggcatcagccacgtgatcaacttcaccctgccggaagtgccggac
gactacgtgcaccgcattggccgaaccggtcgtgcgggtgccgcaggcgtgtcgatcagc
tttgccggggaagacgactcgtatcagttgccgtcgatcgaaacgctgctggggcgcaag
atcagctgtgaaacgccgtcgacgcatctgttgcgagccgtcgagcgcaagcgcccttaa
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