Pseudomonas poae: H045_02195
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Entry
H045_02195 CDS
T02456
Name
(GenBank) DNA-binding protein HU, nu subunit
KO
K03530
DNA-binding protein HU-beta
Organism
ppz
Pseudomonas poae
Brite
KEGG Orthology (KO) [BR:
ppz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppz03032
]
H045_02195
03036 Chromosome and associated proteins [BR:
ppz03036
]
H045_02195
03400 DNA repair and recombination proteins [BR:
ppz03400
]
H045_02195
DNA replication proteins [BR:
ppz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H045_02195
Chromosome and associated proteins [BR:
ppz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H045_02195
DNA repair and recombination proteins [BR:
ppz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H045_02195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HTH_IclR
SSPI
Motif
Other DBs
NCBI-ProteinID:
AGE24515
LinkDB
All DBs
Position
472026..472307
Genome browser
AA seq
93 aa
AA seq
DB search
MAITKDQLIADLAEAVDAPKTTVRALLDQLSQVVADQLENGGEITLPGVGKLKVTERPAR
TGRNPSTGAAIEIAAKKVIKLVVAKGLTDAVNK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctattactaaagaccaactgatcgctgacctggctgaagcagtagacgcaccgaaa
accaccgtgcgcgctctgctggaccaactgagccaggttgttgccgatcagctggaaaac
ggcggcgaaatcactctgccaggcgttggcaaactgaaagtgaccgagcgtcctgcccgt
actggccgtaacccttcgactggcgctgccatcgaaatcgctgccaaaaaagttatcaag
ctggttgtggccaaaggcctgaccgacgctgttaacaagtaa
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