KEGG   Pseudomonas poae: H045_10870
Entry
H045_10870        CDS       T02456                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ppz  Pseudomonas poae
Pathway
ppz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    H045_10870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppz03400]
    H045_10870
DNA repair and recombination proteins [BR:ppz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H045_10870
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      H045_10870
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 SMC_N nSTAND1 AAA_29 DnaJ_CXXCXGXG AAA_25 AAA_16 Anti-TRAP
Other DBs
NCBI-ProteinID: AGE26239
LinkDB
Position
complement(2512910..2515372)
AA seq 820 aa
MRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFSTVYAEAQRRYFESVAPYARRLI
DQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSVTTLSSLIRMLYSRAGSYPPGQAML
YAEDFSPNLPQGACPECHGLGRVYEVTEALMVPDPSLTIRQRAVAAWPLAWQGQNLRDIL
VTLGYDVDIPWRDLPKKQRDWILFTEETPTVPVYAGFTPAQTRDALKRKLEPSYQGTFSG
ARRYILHTFSHTQSALMKKRVSQFMQGSACPVCEGKRLTQAALSVKFAGVDIGELSQLSL
SQLAELLRPVAAGQDRMQLSVEKRLAAQRIAQDLLERVSTLIDLGLGYLSLERSTPTLSS
GELQRLRLATQLGSQLFGVIYVLDEPSAGLHPADGEALFTALERLKAAGNSLFVVEHDLE
TMRRADWLIDVGPAAGEHGGQVLYSGPPAGLADVQASQTRAYLFAEGQALNPARREPAGW
LKLEGVTRNNLNDLKVDFPLGCFTAVTGISGSGKSSLVSQALLDLVGSGLGSRVVNDEEP
SLEDDAPQTSGGHIRSGLEHIRRLVQVDQKPIGRTPRSNLATYTGLFDNVRKLFAATPAA
IKRGYDAGQFSFNVAKGRCPQCEGEGFVSVELLFMPSVYAPCPTCHGARYNPETLAIKWQ
GLSIAQVLGLTVEQAVEVFAEQPAVLRSLQVLRDIGLGYLRLGQPATELSGGEAQRIKLA
TELQRNARGATLYVLDEPTTGLHPRDVDRLLSQLNQLVDAGHTVVVVEHEMRVVAQSDWV
IDIGPGAGDEGGNVVACGTPQKVAKSKKSRTAPFLARERV
NT seq 2463 nt   +upstreamnt  +downstreamnt
gtgcgcggcgcccgtgaacacaacctgcgcaatgtcgatgtggatattccacgggatgcc
ctggtggtgtttaccggcgtgtcgggttccggcaaatcgtcgctggcgttttccacggtg
tatgccgaggcccagcgccgttatttcgagtcggtggcgccttatgcgcggcgcctgatc
gatcaggtcggcgtgccggacgtggattccatcgagggtctgccgccggcggtggctctg
caacagcagcgcggcacgccgagcgcgcgttcctcggtgggcagtgtgaccaccttgtcg
agcctgatccgcatgctgtattcgcgcgccggcagctacccgccgggtcaggcgatgctg
tatgccgaggacttttcgccgaacctgccccagggcgcctgcccggagtgccatgggctg
ggtcgcgtgtatgaggtgaccgaggcgttgatggtgcccgatccttcattgacgatccgt
cagcgtgcggtggctgcctggccgctggcgtggcagggccagaacctgcgcgacatcctc
gtgaccctgggttatgacgtcgacatcccctggcgcgacctgccgaaaaagcagcgcgac
tggattctcttcaccgaagaaaccccgacggtgccggtgtacgccggcttcaccccggcg
cagacgcgtgatgcgttgaagcgcaagctggagccgagctatcagggcactttcagcggt
gcgcggcgctacatcctgcacaccttcagtcacacccaaagcgcgctgatgaaaaagcgc
gtgtcgcagttcatgcagggcagcgcctgcccggtgtgcgagggcaagcgcctgacccag
gcggcgctgtcggtgaagtttgccggcgtggatattggcgagttgtcgcagctgtctctt
tcacaactggccgagctgttgcgcccggtggcggcggggcaggaccgcatgcagctgtcg
gtggagaaacgcctcgccgcgcaacgcatcgcccaggacctgctcgaacgcgtcagcacc
ttgatcgacctcggcctgggctacctgtctctggagcgcagtacgccgaccctgtcgtcc
ggcgagttgcagcgcttgcgcctggccacgcaattgggttcgcagctgttcggcgtgatc
tatgtgctggacgagccctcggcgggtttgcacccggctgatggcgaggcgctgttcacc
gcccttgagcgcctcaaagccgccggcaattcgctgtttgtggtggagcacgacctggaa
accatgcgccgcgccgactggctgatcgatgtgggcccggccgccggtgagcatggcggg
caagtgctgtacagcggcccgccggccgggttggcggacgtgcaggcctcgcagacccgc
gcctacctgtttgctgaagggcaggcgttgaatcctgcgcggcgcgaacccgccgggtgg
ttgaaactggaaggcgtgacgcgcaacaacctcaatgacttgaaggtggatttcccgctg
gggtgtttcacggcggtgaccggtatttccggctcgggcaaatccagcctggtcagccag
gcgctgctggacctggtaggcagcggcctcggcagccgggtggtcaatgacgaagaaccc
agcctggaggacgacgccccgcaaaccagcggcggacacatccgctccgggctcgaacat
atccgtcggctggtgcaggtggaccagaaacccatcggccgcaccccgcgttccaatctg
gcgacgtacaccgggctgttcgacaacgtgcgcaaactgtttgccgccacgccggcagcc
atcaagcgcggctatgatgccgggcaattctcgttcaacgtcgccaagggccgttgcccg
cagtgcgagggtgaaggttttgtcagcgttgagttgctgttcatgcccagcgtgtacgcg
ccatgcccgacctgccatggcgcgcgctacaaccccgagaccctggcgatcaaatggcaa
ggtctgagcatcgcccaggtgctggggctgacggtggaacaggcggttgaggtgttcgcc
gagcagcccgccgtgctgcgttcattgcaggtgctgcgcgatatcggtttgggctatctg
cgcctgggtcagcccgcgaccgagctgtccggcggcgaagcgcagcgcatcaagctcgcc
accgagctgcaacgcaatgcccggggcgcgaccctgtatgtgctcgacgagccgaccacc
ggcttgcatccacgggacgtcgaccgcctgctcagccagctcaatcaactggtggacgcc
gggcacacggtggttgtggtggagcatgaaatgcgcgtggtggcccagagcgactgggtg
atcgacatcgggccgggggcaggggatgagggcggcaacgtggttgcctgcggcacgccg
caaaaggtcgccaagagcaagaaaagccgcaccgcgccgtttctggcgcgcgagcgggtc
taa

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