Pseudomonas poae: H045_12260
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Entry
H045_12260 CDS
T02456
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ppz
Pseudomonas poae
Pathway
ppz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H045_12260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppz03400
]
H045_12260
DNA repair and recombination proteins [BR:
ppz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H045_12260
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H045_12260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
HAMP
AAA_22
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
AGE26517
LinkDB
All DBs
Position
complement(2826647..2828662)
Genome browser
AA seq
671 aa
AA seq
DB search
MSDFQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLASLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLMGAIEGIKVELAERLEYLRANNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRDSGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVIEQVVRPTGLVDPQ
IEIRPALTQVDDLLSEINKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRREKQIAFNLEHGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDE
IGKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttccagctcgtcacccgctttgaaccggccggcgaccagcccgaagccatt
cgccagatggtcgaaggcatcgaggccggcctggcgcaccagacgctgctcggggtgacc
ggttcgggcaagaccttcagcattgccaacgtgatcgcgcagatcaaccgcccgaccctg
gtgctggcgccgaacaagaccctggccgcgcagctgtacggcgagttcaaggcgttcttc
ccgaacaatgcggtggagtatttcgtctcctactacgactattaccagcccgaagcctac
gtgccgtcgtccgacaccttcatcgagaaagatgcgtcgatcaacgaccatatcgagcag
atgcgcttgtcggcgaccaaggcgttgcttgagcgcaaggacgcgatcatcgtcaccacc
gtgtcgtgcatctacggcctgggcagcccggaaacctatctgaagatggtgttgcacgtt
gaccgtggcgacaaactcgaccagcgcgaattgctgcgccgcctggcgagcctgcaatac
acccgcaacgacatggactttgcccgcgccaccttccgcgtgcgcggcgatgtgatcgac
atctacccggccgaatcggacctggaggctatccgcatcgagctgttcgacgatgaggtg
gaaagcctgtcggctttcgatccattgactggggaggtgatccgcaagctgccgcgcttc
accttctaccccaaaagccactatgtaacgccccgggaaaccctgatgggcgccattgaa
ggtatcaaggtcgagctggccgagcgcctggaatacctacgcgccaacaacaagctggtg
gaagcccagcgcctggagcagcgcacccgcttcgacctggagatgatcctggagctgggc
tactgcaacggcatcgaaaactactcgcgctatctgtcgggccgtgactccggcgcgccg
ccgccgacgctgtacgactacttgccgccggacgccttgctggtgatcgacgagtcccac
gtcagcgtgccgcaagtaggcgcgatgtataagggcgaccgctcgcgcaaggagaccctg
gtggaatacggtttccgcctgccgtcggcgctggacaaccggccgatgcggtttgacgag
tgggaggcgatcagcccgcagaccatttttgtgtcggccacgccgggcaattatgaggcc
gagcatgcgggccgggtgatcgagcaggtggtgcggccgaccggcctggtcgacccgcag
atcgaaatccgcccggcgctgacccaggtcgacgacctgctgtcggagatcaacaagcgc
gtggcgctggaggagcgggtgctggtgaccacgctgaccaagcgcatgtccgaagacctc
accgactacctggccgaccacggcgtgcgcgtgcgatacctgcactcggacatcgacacg
gtggagcgggtggagatcatccgtgatctgcgcctgggcacctttgatgtgctggtgggc
atcaacctgctgcgcgaaggtctggacatgccggaagtgtcgctggtggcgattctggat
gcggacaaggagggcttcctgcgctccgaacgttcactgatccagaccattggccgtgcg
gcgcgtaacctcaatggccgggcgatcctgtatgcggaccgcatcaccggttccatggag
cgcgcgatcggcgagaccgagcggcgccgtgaaaagcagattgccttcaacctcgaacat
ggcattacccccaagggtgtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
ccgggctcgcgcagcaagaagcgcaagggcatggccaaggccgccgaggaaagcgccaag
tacgagaacgaattgcgctcgccgagtgagatcaccaagcggattcgccagttggaagag
aagatgtaccagttggcacgcgatcttgaattcgaggcggcggcgcagacgcgtgatgag
attggcaaattgcgcgagcggttgctggctgtgtga
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integrated database retrieval system
