Pseudomonas poae: H045_18505
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Entry
H045_18505 CDS
T02456
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppz
Pseudomonas poae
Pathway
ppz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H045_18505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppz03021
]
H045_18505
Transcription machinery [BR:
ppz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H045_18505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
BrxR_CTD
HTH_29
HTH_24
Sigma70_ECF
Sigma70_r3
HTH_17
MerR
FaeA
Motif
Other DBs
NCBI-ProteinID:
AGE27763
LinkDB
All DBs
Position
4230546..4231064
Genome browser
AA seq
172 aa
AA seq
DB search
MSSVQPPHSELVGALYRDHRGWLLAWLRRNVACASRAEDLSQDTFVRLLGRTELREPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPESEHPSPEEQQLILEDLKAIDRLLGKL
SSKARAAFLHSRLDGMGHAEIAQRLGVSVPRVRQYLAQGIRQCYIALYGQPL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtcagtccagcctccccacagtgagcttgttggcgcgttgtaccgcgaccatcgt
ggctggctgctggcctggctgcggcgcaatgtggcctgcgccagccgcgccgaagacctc
agccaggacaccttcgtgcgcctgctggggcgtaccgaactgcgcgaaccccgcgaaccg
cgcgcctttctggtggccatcgccaagggcctgctgttcgactacttccgtcgcgcggcg
ctggaacaggcctacctcaccgaattgatgctgatcccggagagcgaacatccctcgccc
gaagaacagcaattgatcctcgaagacctcaaagccatcgaccgcctgctcggcaaactc
tcgagcaaggcccgcgccgcgtttctgcacagccgcctcgatggcatgggccacgccgaa
atcgctcagcgcctgggcgtctccgtgccacgcgtgcgtcagtacctggcccaggggata
cgccagtgctacatcgccttgtacggccagccgctgtga
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integrated database retrieval system
