Pseudomonas poae: H045_19050
Help
Entry
H045_19050 CDS
T02456
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ppz
Pseudomonas poae
Pathway
ppz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H045_19050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppz03019
]
H045_19050
Enzymes [BR:
ppz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H045_19050
Messenger RNA biogenesis [BR:
ppz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H045_19050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AGE27872
LinkDB
All DBs
Position
4352904..4354802
Genome browser
AA seq
632 aa
AA seq
DB search
MSFASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL
ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMN
PQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR
LPAKRQNLLFSATFSNDITALAGKLLHNPERIEVTPPNTTVERIEQRVFRLAASHKRSLL
AHLITHGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNKSQNARTKALADFKAGTV
RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL
LKSIERMTKQKIADGDLMGFDSSAVEAEKPEVRERPDVRNPRNPRGPKGDGPNGGGGGGG
RRDKGKDKGGKDKAPANARGERPAREQKPREGTPAREQRQPSQPPRAASDRAPDEFLDDD
VDNFGNRVDYVPQAKPAQGRGRRPGAPAQGAGASAPRGGQPQGARQNGPRNSSGGTTGTP
PAKRSGPRNGPRNGAPRDGQARREDSRSNNRRPARDEPQRSSEPAVQNPRSGTAPKIIHK
ESKADRFPTPEQLDQLPGRPRGEKPALLTRNR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgcttccctcggtctctccgaggctttagtccgcgccatcgaggcagcgggc
tataccgagcctactccggtgcaacagcgggctattcccgccgtgttgcaaggtcgcgac
ctgatggttgcggcgcagacaggtactggtaaaaccggcggtttcgccctcccgattctg
gagcggttgttccccaacggtcacccggacaaatcccagcgtcacggcccgcgccaaccg
cgcgtactggtcctgacccccacccgcgaactcgcagcccaagtgcacgacagcttcaag
ctgtatgcccgcgacctgaagttcgtcagcgcctgcatcttcggcggcgtcggcatgaac
ccgcaggttcaggccatgtcccgtggcgttgacgtgctggtcgcctgcccgggtcgcttg
ctcgacctgtgcggccaaggcagcgtcgatctgtcccacgtggaaatcctcgtgctggac
gaagccgaccgcatgctcgacatgggctttgtccatgatgtgaaaaaggtcctcgcccga
ctgccggccaaacgtcagaacctgctgttctcggcgacgttctccaatgacatcaccgcc
ctggctggcaagctgctgcacaacccggaacgtattgaagtcacgccgcccaacaccacg
gtcgagcgtatcgaacaacgcgtcttccgcttggccgccagccacaagcgctcgctgctg
gcgcacctgatcacccacggtgcgtgggaacaggtgctggtattcacccgcaccaagcac
ggcgccaaccgcctggccgagtacctggacaagcacggcctcaccgccgtcgccatccac
ggcaacaagagccagaacgcgcgcaccaaagccctggccgacttcaaggccggcactgtg
cgcatcctggtggccaccgatatcgccgcgcgcggcctggatatcgaccagttaccgcac
gtggtcaacttcgagctgccaaacgtcgacgaagactatgtgcaccgtatcggccgtacc
ggccgggccggtcgttcgggcgaagccatctcgctggttgcaccggacgaagaaaaactg
ctgaaaagcatcgagcgcatgaccaagcagaaaatcgctgacggcgacctgatgggcttc
gactccagcgccgtagaggccgaaaagccagaagtgcgcgagcgtccagacgtgcgtaac
ccgcgcaacccacgcggtccgaagggcgatggccccaacggtggcggtggcggcggtggc
cgtcgcgacaagggcaaggacaagggcggcaaggacaaagcgccggccaatgcccgtggc
gaacgcccggcccgcgagcagaagccccgtgaaggcactccggcgcgcgaacagcgtcag
ccgagccagccgccacgcgccgcgtcggaccgtgccccggacgagttcctggacgacgat
gtggacaacttcggtaatcgcgtcgactacgtgcctcaggccaaaccggctcagggccgt
ggtcggcggccgggtgctccggcacaaggcgctggcgcatctgcgccacgtggcggtcag
ccccaaggcgctcgccagaacggcccacgcaacagcagcggtggcaccaccggcaccccg
ccggccaaacgcagcggcccgcgcaacggcccgcgcaacggcgcaccgcgtgacggccag
gcccgccgcgaagactcgcgcagcaacaatcgccgcccggcccgtgacgagccacaacgc
tcctccgagccggccgtgcagaacccgcgcagtggcacggcgccaaagattatccacaag
gagtcgaaagccgaccgcttcccgacacccgagcagttggatcaactgccaggccgtcct
cgtggtgagaaaccagcgctgctgacccgcaaccgctga
DBGET
integrated database retrieval system
