Pseudomonas poae: H045_20380
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Entry
H045_20380 CDS
T02456
Name
(GenBank) hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
ppz
Pseudomonas poae
Pathway
ppz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
H045_20380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppz02044
]
H045_20380
Secretion system [BR:
ppz02044
]
Type VI secretion system
Imp/Vas secretion system core components
H045_20380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
PADRE
Motif
Other DBs
NCBI-ProteinID:
AGE28138
LinkDB
All DBs
Position
complement(4626947..4628281)
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AA seq
444 aa
AA seq
DB search
MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLALGKL
AIVSARGLLPDGTPFNIPQDDLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVEAGEALE
AARYVSQVREVRDDNAPFENRTPVAVGARALRLLTAEDGISDYAAVGLVRIKEKRADRAL
VLDDTYIPPVLDVAASKPLSAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHITQLSPLHPERFFSELVSLAGEFSTFATSGRRPQEYPHYQHDDLALSFAP
VMAALREALSMLIDSKATPIPIVEKAYGVHVAMLADKTLLESASFILVVRADVPGETLRA
RFGQQSKVGSVEHIRDLVNLQLPGIGLLPLPVAPRQLPYHAGSTYYELDRGSEHWQQLGN
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcatcggaacgcagcacttc
cagcagcatgaccgttacctcgagaacctgattgatgcccgcagtcgcccgctgtctgcc
ggcgcctggggcttttccgagctgctgatcgaccagggcctgctggccctgggcaagctg
gcgattgtctcggcgcggggcctgttgcccgatggcacgccattcaatattccccaggac
gacctggcgccgagcccgctgaacattgacgacaacctgcgcgacggcctggtgtacctg
gccttgccgctcaagcgtgcgggtgcgcgggacacggtggaggcaggcgaagcgctggaa
gcggcgcgttacgtgagccaggtgcgcgaagtgcgcgacgataacgcaccgttcgaaaac
cgcacccccgtggccgtaggcgcgcgtgcgttgcgcctgctcaccgccgaggatggcatc
agcgactacgccgccgtgggcctggtgcgcatcaaggaaaaacgcgccgaccgcgccttg
gtactcgacgacacttacatcccgccggtgctggacgtggccgccagcaaaccgctgagc
gcgtttcgcagtgaattgctcggcctgctgcaccagcgcggcgaagccctggccggtcgc
gtggtggcttcgggcgctggcggtgcctcggagattgccgatttcatgctgctgcaactg
gtcaaccgtgcgcagccgctgatccagcacatcacccaactgagcccgctgcacccggag
cgtttcttcagcgaactggtgagcctggccggtgagttctctacctttgccacgtcgggt
cgacgcccccaggaatacccacactaccagcacgacgacctggccctgagcttcgctccg
gtgatggcggcgctgcgtgaagcgctgtcgatgctgatcgacagcaaggccacgccgatc
ccgattgtggagaaagcctatggtgtgcacgtcgccatgctggcggacaagaccctgctc
gagagcgccagtttcatcctcgtggtgcgcgccgatgtgcccggcgaaaccctgcgcgcg
cgcttcggccagcagagcaaggtcggttcggtggagcacatccgcgatttggtcaacctg
caattgccgggcatcggcctgttgcccctgccggtcgcgccgcgccaattgccgtaccac
gcaggctccacctactacgagttggaccgaggcagcgaacactggcagcaactgggtaat
tccggtgggttcgctttccatatcgccgggcagttcccgggcttgaacctggccttctgg
gcgattcgaggataa
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