KEGG   Pseudomonas poae: H045_20440
Entry
H045_20440        CDS       T02456                                 
Name
(GenBank) type VI secretion ATPase ClpV1
  KO
K11907  type VI secretion system protein VasG
Organism
ppz  Pseudomonas poae
Pathway
ppz02025  Biofilm formation - Pseudomonas aeruginosa
ppz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H045_20440
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    H045_20440
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppz02044]
    H045_20440
Secretion system [BR:ppz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H045_20440
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 Zeta_toxin Sigma54_activat AAA_25 nSTAND3 TniB AAA_7 ATPase_2 NACHT AAA_14 AAA_18 Torsin Clp_N Hpr_kinase_C SRP54 CbiA NBD_SMAX1
Other DBs
NCBI-ProteinID: AGE28150
LinkDB
Position
4638629..4641283
AA seq 884 aa
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSAEFDKIKPEALSERFDEYVGDSPENALSASDGFNAGVPGEASGAM
APSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGV
GKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQASP
KPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALT
RRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQVLDEALEASVKLSHRYIPARQLPDKS
VSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIDIRARQTNSEALL
SAERERLTTLESRWAEEKTLVDELLATRATLREKAGVVDSGSDELRTQLVDLQQRLSALQ
GETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMIA
KRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAH
TVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVMED
GEGRVIDFKNTLILLTTNAGTELISQVCKDPANIPEPEEIAKALRQPLLEIFPPALLGRL
VTIPYYPLSDTMLKAITRLQLGRIKKRVESTHKVAFDYDDAVVDLIVSRCTETESGGRMI
DTILTNSLLPDMSREFLTRMLEGKALAGVRISSRDNELHYQFND
NT seq 2655 nt   +upstreamnt  +downstreamnt
atgggtgaaatcagtcgcgccgcactgttcggcaaactcaacagcgtggcctacaaggcc
atcgaagccgccaccgtgttctgcaagctgcggggcaacccgtatgtggaactggctcac
tggttccaccagttgctgcaactgcaggactcggacctgcaccgcatcatccgccagttc
aacgtggaaccggcgcgtctggcccgtgacctcaccgaagccctggaccgcctgccgcgc
ggctcgacgtcgatcaccgacctgtcctcccacgtggaagaagccgtggagcgcggctgg
gtgtacggcagcctgatgtttggcgaaagccaggtgcgcaccgggtatctggtgctgggc
atcttgaagacgccgagcctgcgtcacgccctgctgggcttgtccgccgagttcgacaag
atcaagcccgaagccctgagcgagcgctttgacgaatacgttggcgactcgccggaaaac
gccttgagcgccagcgacggtttcaatgccggcgtgcccggcgaagccagcggcgccatg
gcgcccagcgcgatgggcaagcaggaagccctcaaacgcttcaccgtggacctcaccgaa
caggcgcgcagcggcaagcttgacccgatcgtgggacgtgacgaagagatccgccaactg
gtggacatcctgatgcgccgacgccagaacaacccgatcctcaccggtgaagccggcgtg
ggcaagaccgccgtggtcgaagggttcgccctgcgtatcgtcgccggtgacgtaccgccg
gcgctcaaggatgtggagctgcgcagcctcgacgtgggcctgctgcaagccggcgccagc
atgaaaggcgagttcgaacagcgcctgcgccaggtcatcgaagacgtgcaagcctcaccc
aagccgatcattctgttcatcgacgaagcccacaccctggtgggtgccggtggcgccgcc
ggcacgggcgatgcagccaatctgctcaagcctgcgctggcccgtggcaccctgcgtacc
gtggccgccaccacctgggccgagtacaaaaagcacatcgagaaagacccggctctgacc
cgccgcttccaggtggtccaggtggccgagccgtcagaagacaaggcgctgctgatgatg
cgcggcgtggcatcgaccatggagaagcaccatcaggtgcaggtgctcgacgaagccctg
gaagcttcggtgaagttgtcgcaccgctacatccccgctcgccagctacctgacaaatcc
gtgagcctgctggacactgcctgcgcccgcgtcgccatcagcctgcacgccgtgcccgcc
gaagtggacgacagccgccgccgtatcgaagcgctggaaaccgagctgcagatcatcgcc
cgcgaacacgccatcggcatcgacattcgcgcgcgccaaaccaactccgaggcgctgttg
agcgctgaacgcgagcgcctgaccaccctggaaagccgctgggccgaagagaagaccctg
gtggatgagttgctcgccacccgcgcaaccctgcgcgaaaaagccggcgtggtggacagc
ggcagcgatgagttgcgcacgcaactggtcgacctgcaacaacgcctcagcgccctgcag
ggcgaaaccccactgatcctgccgaccgtggattaccaggccgtggcctcggtggtcgcc
gactggaccggcatcccggtgggccgtatggcacgcaacgagttggagacggtgctcaac
ctcgatcagcacctgaagaaacgcatcatcggccaggaccacgccttgcagatgatcgcc
aagcgcatccagacgtcccgcgccggcctcgacaacccgagcaagccgattggcgtgttc
atgctcgccggcacgtccggcgtgggcaagaccgaaaccgcccttgccctggctgaagcc
atgtacggcggtgagcagaacgtgatcaccatcaacatgagcgagttccaggaagcccac
acggtatcgacgctcaagggcgcgccaccgggctatatcggctacggcgaaggcggcgtg
ctgaccgaagcggtgcggcgcaagccctacagcgtggtgctgctggacgaagtggaaaaa
gctcacccggatgtgcatgaaatcttcttccaggtgttcgataaaggcgtgatggaagac
ggcgaaggccgggtgatcgacttcaagaacaccctgatcctgctgaccaccaacgccggt
accgagctgatttcccaggtgtgcaaggacccggcgaacatccccgagcccgaggaaatc
gccaaggccctgcgccagccgctgctggagattttcccgccggcgctactgggccgcctg
gtgacgattccgtactacccgctgagtgacacgatgctcaaggcgatcacccgcctgcaa
ttgggccgcatcaagaagcgtgtggagagcacccacaaagtcgccttcgactacgacgat
gcggtggtcgacctgatcgtctcgcgctgcaccgaaactgaaagcggcgggcgcatgatc
gacaccatcctcaccaacagcctgttgccggacatgagccgtgaattcctcacgcgcatg
cttgaaggcaaggcgctggcgggggtgcggatcagcagccgggataacgagctgcactac
cagttcaacgattga

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