Pseudomonas poae: H045_21010
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Entry
H045_21010 CDS
T02456
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ppz
Pseudomonas poae
Brite
KEGG Orthology (KO) [BR:
ppz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppz03016
]
H045_21010 (trmE)
Transfer RNA biogenesis [BR:
ppz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
H045_21010 (trmE)
Prokaryotic type
Methyltransferases
H045_21010 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
RsgA_GTPase
ABC_tran
AAA_28
Gtr1_RagA
YmdB
Roc
Motif
Other DBs
NCBI-ProteinID:
AGE28264
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All DBs
Position
complement(4764407..4765777)
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AA seq
456 aa
AA seq
DB search
MSAPRETIAAVATAQGRGGVGIVRISGPLAGRAAQLISGRELKPRYAHYGPFLDADKSVL
DEGLALYFPGPNSFTGEDVLELQGHGGPVVLDMLLQRCLQLGCRLARPGEFSERAFLNDK
LDLAQAEAIADLIEASSAQAARNALRSLQGAFSLRVHNLTEQLISLRIYVEAAIDFPEEE
IDFLADGHVLAMLDKVRDELSTVLREAGQGALLRDGMTVVIAGRPNAGKSSLLNALAGRE
AAIVTEIAGTTRDILREHIHIDGMPLHVVDTAGLRDTDDQVEKIGVERALKAIGEADRVL
LVVDATAPEAVDPFALWPEFLEQRPDPAKVTLIRNKADLTGEAIAMETSADGHVTISLSA
KSSGAGLELLRDHLKACMGYEQTSESSFSARRRHLEALRHASAALEHGRAQLTLAGAGEL
LAEDLRQAQQLLGEITGAFSSDDLLGRIFSSFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcctcgtgaaaccatcgctgccgttgcgaccgctcaaggtcgaggcggtgtc
ggtatcgttcgaatttccgggccgcttgccggcagggcggcgcagctaatcagtggccgc
gagctgaaaccgcgctatgcccattacggtccgtttcttgacgctgacaaaagcgtcctc
gatgaaggcctggcgctctacttcccggggcccaactcattcaccggtgaagatgtcctg
gagctgcaaggacatggcggtccggtggtactggatatgctgctgcaacgttgcctgcag
ctgggttgccgtctggctcgcccgggcgagttcagcgaacgtgcatttctcaatgacaag
cttgacctggcccaggctgaagcgattgccgacctgatagaggccagttccgcacaagct
gcgcggaacgccttgcgctcgctgcagggcgctttctccctgcgtgtgcataacttgacc
gagcaactgatcagcctgcgtatctacgttgaggcagcgattgattttcctgaagaagaa
atcgacttccttgccgacggccacgttctggcgatgctggataaagtgcgtgacgagtta
tccacagtattgcgcgaagccgggcagggcgccttgctgcgcgacggcatgacggtggtt
attgccgggcgtcccaatgccggtaagtcgagcctgctcaatgcactcgcagggcgtgaa
gctgccatcgtcaccgagattgccggtactacacgggatatcctgcgcgaacatatccac
atcgatgggatgccattgcatgtggtggatactgccgggctgcgcgacaccgacgaccag
gtggaaaagatcggtgtggaacgggcgctcaaggcgatcggcgaagcggaccgcgtgttg
ctggtcgtggatgccaccgcaccggaggctgtggatccttttgccttgtggcccgaattc
ctcgagcaacggccggacccggccaaagtcaccttgatccggaacaaggcggatctcacg
ggcgaagccattgcaatggagaccagcgcggatggccacgtcaccataagcctgagtgca
aagtcatcgggtgctggcctggaactgctgcgtgatcacctcaaagcctgcatgggctac
gaacagacctcggaaagcagcttcagcgcgcgccgcaggcatctggaggcgctgcgccat
gccagcgcggcgttggagcacggccgggcacagctgaccctggcaggcgccggtgagctg
ctggcggaggacttgcgtcaagcgcagcagctgttgggtgagatcaccggcgccttcagc
tcagatgacttactcggacggatcttctccagcttttgcatcggtaaataa
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