KEGG   Pseudomonas poae: H045_21470
Entry
H045_21470        CDS       T02456                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ppz  Pseudomonas poae
Pathway
ppz03030  DNA replication
ppz03410  Base excision repair
ppz03420  Nucleotide excision repair
ppz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H045_21470
   03410 Base excision repair
    H045_21470
   03420 Nucleotide excision repair
    H045_21470
   03440 Homologous recombination
    H045_21470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppz03032]
    H045_21470
   03400 DNA repair and recombination proteins [BR:ppz03400]
    H045_21470
Enzymes [BR:ppz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H045_21470
DNA replication proteins [BR:ppz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     H045_21470
DNA repair and recombination proteins [BR:ppz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     H045_21470
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H045_21470
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AGE28356
LinkDB
Position
4863073..4865856
AA seq 927 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRRQYPDSPFAVVFD
AKGGTFRDDMYADYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAASRSVVISTGDKDMAQLVDGHITLVNTMTGSAMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPSLPIRGAKTLRAKLEEHREM
AFLSYRLATIKIDVPLDIGLDDLHLIEPDREKLLELYTLLEFKSWYDEIQRDAKRVELSA
APVVAEVVETALTAPVETTYTTILDQPTFERWLKKLQDAPLFAFDTETTGIDAQKAQLVG
VSFAVQPHEAAYIPLTHSYIGVPDQLDRDTVLLALKPLLEDPAKLKVGQHGKFDMNILAN
CAIGGDPEQGITVRGIAFDTMLESYVLNATATRHDMDSLAKKYLDYDTVSFQDIAGKGAK
QLTFDQIALEQAGPYAAEDADVTLRLHQALHAQLAAIPSLASVLTDIEIPLVPVLARIER
QGALVDKALLGIQSIELGNKMVELERQAFEIAGEAFNLGSPKQLGSILYDKLGMPVLKKT
GKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQ
AVTATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLSRDE
GLMNAFRHNLDVHTATAAEVFKVELDDVTSDQRRSAKAINFGLIYGMGAQKLGKDIGVDT
KTAKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYVPDINSNKPQERAAAER
TAINAPMQGTAADIIKKAMVRVDNWLTDSGLDAKVILQVHDELVLEVREDLVAEVSERIR
EHMSAAAQLDVPLLVEVGVGNNWDEAH
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgagccaagcgcccctcgtcctggtggacggttcttcttatctgtaccgcgccttccat
gcactgccaccgctgaccacttccaagggcctgccgaccggtgcggtcaagggcgtgctg
aacatgctcaagagcctgcgccggcagtatccggacagcccgttcgcggtggtgttcgac
gccaagggtgggacctttcgcgatgatatgtacgccgattacaaggccaaccgcccgagc
atgcccgacgacatgcgcctgcagatcgagccgctgcaccagagcgtgatcgccctgggc
tttccgttgctgtgcgtcgaaggcgtcgaagccgatgacgtgatcggcactctggcccgc
agcagcgcagccgccagccggtcagtggtgatttccaccggtgacaaggacatggcgcag
ctggtggacgggcacattaccttggtcaacaccatgaccggtagcgcgatggacgtagag
ggcgtgaaggagaaatttggtgtcgctccggagcagatcatcgactatctggcgttgatg
ggcgattcgtccgacaacattccgggcgtaccgggcattggtccgaagaccgcgtccggc
ttgctggtgggcgtcaatggtggcctcaaagagctctatgagcagttggacattgtgccg
agcctgccgattcgcggcgccaagaccctgcgcgccaagctggaagagcaccgcgagatg
gcgttcctgtcttaccggttggccaccatcaaaatcgacgtgccgctggatatcggcctg
gacgacctgcacctgatcgagccggaccgcgaaaagctgcttgagctgtataccctgctc
gaattcaagagctggtacgacgagattcagcgcgatgccaagcgcgtcgaactgagcgcc
gcgccggtggtggccgaggtcgtcgaaactgcactgacagcccccgtggaaacgacctac
accaccatcctcgatcagccgaccttcgaacgatggctgaaaaagcttcaggacgcgccg
ttgttcgcgttcgacaccgaaaccaccggcatcgacgcgcaaaaagcgcaattggtcggg
gtttcctttgccgtgcagccccatgaagcagcctacatcccgttgactcactcctacatc
ggcgtgccggaccaactggaccgtgacaccgtgctgctggccttgaaacctctgctggaa
gaccccgccaagctcaaggtcggccagcacggcaagttcgacatgaacatcctggccaac
tgcgccatcggcggcgaccctgagcaaggcatcaccgtgcgcggtatcgccttcgacacc
atgcttgaatcctatgtgctcaacgccaccgccactcggcacgacatggacagcctggcc
aagaagtacctggactacgacactgtcagtttccaggacatcgctggcaagggcgccaag
cagctgacttttgatcagatcgcgctggaacaggctggcccgtatgcagccgaagatgcc
gacgtgaccttgcggctgcaccaggcgctgcacgcgcaattggccgcgatcccgagcctg
gccagtgtgctgacggatatcgaaatcccgttggtgccggtgttggcgcgcatcgagcgc
cagggtgcgctggtggacaaggcgctgctgggtatccagagcatcgagctgggcaacaag
atggtcgagctggagcgccaggcattcgagatcgccggtgaggcgttcaacctgggctct
cccaagcagctcggctctattctctacgacaagctcggcatgccggtgttgaaaaagact
ggtaaagggcaggcctcgacggcggaagaagtgctggccaaactggccgaagatgactat
ccgctgcccaaggtgctgatgcagtaccgcagcatgagcaagctcaaaagcacctacacc
gaccgcctgccggaacagatcaacccgcgcaccgggcgtatccacacgtcttatcaccag
gcggtgacggcgaccgggcgtctgtcctccagcgacccgaacctgcagaacatcccggtg
cgcaccgctgaagggcgacgcatccgccaggcgtttgttgcgcccaagggttacaagctg
ctggcagcggactattcgcagatcgagctgcgcatcatggcgcacctttccagggacgaa
ggcttgatgaatgccttccgccacaatctggatgtgcacaccgccactgcggccgaggtg
ttcaaggtggagttggacgatgtcacttccgaccagcgccgcagtgccaaggcgatcaac
ttcggcctgatctatggcatgggcgcgcagaagctgggcaaggacattggcgtcgatacc
aagaccgccaaggcttatatcgatgtgtatttcgcccgctatcccggggtgcgcgagtac
atggagcgcacccgcgcccaggcggccgaccagggttacgtggaaaccttctttggccgc
cgcctgtacgtgccggatatcaattccaacaaaccccaggaacgtgcggccgccgagcgc
acggccatcaacgcgccgatgcagggcaccgccgccgatatcatcaagaaggccatggtg
cgcgtggataactggctgaccgactcgggcctggatgccaaggtgatcctgcaggtacac
gatgaattggtgctggaggtacgtgaggatctggtcgccgaggtcagcgagaggattcgt
gagcacatgagcgccgccgcgcaactggacgtgccactgctggtggaagtaggcgtgggc
aacaactgggacgaagcgcactga

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