KEGG   Pseudarthrobacter quantipunctorum: WHH00_04195
Entry
WHH00_04195       CDS       T10898                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
pqa  Pseudarthrobacter quantipunctorum
Brite
KEGG Orthology (KO) [BR:pqa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pqa03016]
    WHH00_04195
Enzymes [BR:pqa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     WHH00_04195
Transfer RNA biogenesis [BR:pqa03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    WHH00_04195
 Prokaryotic type
   tRNA splicing ligases
    WHH00_04195
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: WXK94017
UniProt: A0ABZ2R6H3
LinkDB
Position
921422..922588
AA seq 388 aa
METINSKLLNWASILDDKTREQAVQASQLPFIYPHLALMPDAHLGKGATVGSVIPTLHAI
MPAAVGVDIGCGMIAVRTQYSLKGLPRDRKKLREDIERAIPLSAGHNNRTVLPTAEPRIA
ELKRLAAEAGFNPGQYVEKWDLQLGSLGSGNHFIEVCADETDAVWLFLHSGSRGIGNKIA
QHHIGVAQHVVTKRRIHLPDPDLAYLEEGTPQFDRYIAELRWAQHFALLNREEMMDRVSA
QFGRWVGGPVTELERVNCHHNFTQQEIHYGKSVWVSRKGAIKAAPGDPGLIPGSMGTSSY
VVEGLGNVASLNSSPHGAGREYSRNAARKTFSLDELKKAMRGIEFRASEAFIDEIPAAYK
PIDVVMQDAADLVTVRHKLRQLVNVKGN
NT seq 1167 nt   +upstreamnt  +downstreamnt
atggaaacgatcaacagcaagctgctgaactgggcctcgatcctggatgacaagacccgt
gagcaggcggtgcaggcctcgcagctgccgttcatctatccgcaccttgccctgatgccc
gatgcgcacctgggaaagggcgccaccgtgggctcggtgatccccaccctgcacgcgatc
atgccggcggccgtgggggttgatattggctgcggcatgatcgcggtccggacccagtac
tccctgaagggcctgcccagggaccggaagaaactgcgtgaggacatcgaacgggccatt
ccactgtccgcgggacacaacaacaggaccgtgctgcccacggctgaaccaaggatcgcg
gagctgaagagactggccgcggaagcaggtttcaaccccggccagtatgttgagaaatgg
gatctccagctgggctcgctcggatcgggcaaccacttcattgaggtttgcgccgacgag
accgacgccgtgtggctgttcctgcactccggttcgcgcggcatcggcaacaagatcgcc
cagcaccacatcggcgtcgcgcagcacgtggtgaccaagaggcggatccacctgccggac
cctgacctcgcctacctggaggaaggcacaccgcagttcgacaggtacatcgcggagctg
cgctgggcccagcacttcgcgctcctgaaccgcgaagagatgatggaccgcgtcagcgca
cagttcggccgctgggtgggcgggcccgtcacggaactcgagcgggtcaactgccaccac
aacttcacccagcaggagatccactacggcaagtccgtctgggtgtcacgcaagggcgcc
atcaaagccgcgcccggcgatcctggacttatcccggggtccatggggacgtcgtcgtac
gtggtggagggcctcggcaacgtggcgtcgctgaactcctcgccgcacggggcgggccgg
gaatactcacgcaacgccgcccgcaaaacgttctccctggacgaactgaaaaaggccatg
cgggggatcgagttccgggcctcggaggcgttcatcgatgagatacccgccgcttacaag
cccatcgacgtcgtcatgcaggacgccgcggacctggtcaccgtccggcacaagctgcgg
cagctggtcaacgtcaagggaaactga

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