Pseudarthrobacter quantipunctorum: WHH00_04295
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Entry
WHH00_04295 CDS
T10898
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pqa Pseudarthrobacter quantipunctorum
Brite
KEGG Orthology (KO) [BR:
pqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pqa03032
]
WHH00_04295
03400 DNA repair and recombination proteins [BR:
pqa03400
]
WHH00_04295
Enzymes [BR:
pqa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WHH00_04295
DNA replication proteins [BR:
pqa03032
]
Prokaryotic type
DNA Topoisomerases
WHH00_04295
DNA repair and recombination proteins [BR:
pqa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WHH00_04295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WXK94035
LinkDB
All DBs
Position
944578..945576
Genome browser
AA seq
332 aa
AA seq
DB search
MRLRRSNASGRGYRRVAAGTGFSYRDLDGSTLPPGPTRDRLESIGIPPAWTDVWIAPFEN
GHIQATGLDAVGRRQYIYHPEWRERKDRVKFDRALQLAESLPAARRRVTMDLRGEGFTRE
RVLAGAFRMLDSGSLRVGSERYTNENGSHGLATLLCAHVQVRKDRIHLSFPAKSGKDWES
EIRDADLAALLRQLKRRGGNARLLAFKEGRRWRPVTSADINAYVKERTGSDFTAKDFRTL
RGTAAAAASLARTGPQRTAAKRKRAISRAMMDASEVLGNTPSIARKSYVDPRVLDHYHES
ETIDPKRPDSAEAELRALLYREGDVVPLAKSG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctccgccgcagcaacgcctcgggccggggctaccgccgtgtcgccgccggcacg
ggcttcagctaccgggaccttgacggctcaacactgccacccggccccacccgggacagg
ctggaaagcattggcattccgcctgcctggacagacgtctggattgccccgtttgaaaat
ggccacatccaggcaaccgggctggatgccgtgggccggcggcagtacatctaccatccg
gaatggcgggaacggaaggaccgcgtcaagttcgaccgtgccctgcagctggccgaatcg
ctgcccgccgcaaggcgccgggtcaccatggacctgcggggggaagggttcacgcgcgaa
cgggtccttgccggtgccttcaggatgctggacagcgggtcgctgcgggtggggtctgaa
cggtacacgaacgaaaacggcagccacgggcttgccaccctgctgtgcgcccacgtgcag
gtgcgcaaggaccggatccacctgagttttccggccaagagcgggaaggactgggaatcg
gaaatccgcgacgccgacctcgctgccctgctgcgccagctcaaacgccgcggcgggaac
gccaggctcctggcgtttaaggagggccggcgctggcgtcccgtgaccagcgcggacatc
aacgcctacgtgaaggagcggaccggctccgacttcaccgccaaggacttccggaccctg
cgcggaaccgcggcggccgccgccagcctggcccgaaccggcccgcagcggacggccgcc
aaacgcaagcgcgccatcagccgggccatgatggacgcctccgaggtgctgggcaacacc
ccgtccatcgcccgcaagagctacgtggacccgcgcgtgctggaccattaccacgaaagc
gaaaccatcgaccccaaacggccggactccgccgaagccgagctgcgggcgctgctgtac
cgggagggcgacgtggttccgctggcgaaaagcggctga
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