Pseudarthrobacter quantipunctorum: WHH00_07315
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Entry
WHH00_07315 CDS
T10898
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pqa Pseudarthrobacter quantipunctorum
Pathway
pqa02024
Quorum sensing
pqa03060
Protein export
pqa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pqa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
WHH00_07315 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
WHH00_07315 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WHH00_07315 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pqa02044
]
WHH00_07315 (ffh)
Enzymes [BR:
pqa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
WHH00_07315 (ffh)
Secretion system [BR:
pqa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
WHH00_07315 (ffh)
Eukaryotic Sec-SRP protein
WHH00_07315 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
APS_kinase
AAA_30
Zeta_toxin
nSTAND3
AAA_16
AAA_18
NPHP3_N
cobW
Thymidylate_kin
MeaB
DUF285
Mg_chelatase
6PF2K
ATP_bind_1
TAF4
MobB
AAA_31
AAA_33
TsaE
NB-ARC
DUF6596
GT-D
Chlamy_scaf
Motif
Other DBs
NCBI-ProteinID:
WXK94600
LinkDB
All DBs
Position
1604453..1606036
Genome browser
AA seq
527 aa
AA seq
DB search
MFNSLSDRLTATFKNLRGKGRLTEADVDATVREIRRALLDADVAVPVVREFTGRVRERAL
GAEVSGALNPSQQIVKIVNEELVEILGGETRRIRLAKSGPTIIMLAGLQGAGKTTLAGKL
SKWLKAQGHSPMLVACDLQRPNAVTQLQIVGQRAKVPVFAPHPGATYTELEHPAGDPVEV
ARAGVEEARQKLHDVVIVDTAGRLGVDADMMEQARQIRRAIVPNEVLFVIDSMIGQDAVN
TALAFDEGVNFTGIVLSKLDGDARGGAALSVASVTGKPVMFASTGEGLDDFELFHPDRMA
SRILDMGDVLTLIEQAEKSWDKDEAARMAKKFADQEDFTLDDFLAQMQQIRNMGSMKKML
MMMPGAQNIRQQLEQFDEREIDRVEAIVRSMTPHERVAPKIINGSRRARIARGSGVHVSE
VNGLLERFAQAQKMMKKMAQGGMPGMPGMPGLPGAGGGARKNAKNAPKKKAKSGNPAKAA
QERKDAEARRANAAKALPTGAAFGQQAGDFDPSQLNLPKGFDKFLGK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaattcactctctgaccggttgacagcaaccttcaagaacctgcgcggtaaaggc
aggcttactgaagccgacgtcgatgccacagtccgcgagatccgccgcgcccttttggac
gccgatgttgccgttccggttgtccgtgagttcaccggccgggtgcgggaacgcgccctg
ggcgctgaggtttccggtgcactgaacccgagccagcagatcgtcaagatcgtcaacgag
gaactcgtggagatcctcggcggtgaaacccgccggatccgcctggccaagagcgggccc
accatcatcatgctcgccggcctccagggtgccggcaagaccaccctcgccggcaagctg
tccaagtggctgaaggcacagggccacagccccatgctcgtggcctgcgacctccagcgc
cccaacgctgtgacgcagctgcagatcgtcggccagcgcgccaaggtgcccgtgttcgca
ccccaccccggcgccacctacaccgagcttgagcacccggccggggacccggttgaggtg
gcccgcgccggtgttgaggaagcacgccagaagctccacgacgtcgtgatcgtggacacc
gccggccggctgggcgtagacgcggacatgatggagcaggcgcgccagatccgccgcgcc
atcgtgcccaacgaggtcctgttcgtcatcgactccatgatcggccaggacgccgtcaac
acggcgctcgcctttgatgaaggcgtcaacttcaccggcatcgtgctgtccaagctcgat
ggcgacgcccgcggcggtgccgcgctgtccgtggcgtcggtcaccggcaagcccgtcatg
tttgcgtccactggcgaaggcctggacgacttcgagctcttccacccggaccggatggcc
tcccgcatcctggacatgggcgacgtcctcaccctgatcgagcaggccgagaagtcctgg
gacaaggacgaagccgcccggatggcgaagaagttcgccgaccaggaggacttcaccctc
gacgacttcctggcccagatgcagcagatccgcaacatgggctccatgaagaaaatgctc
atgatgatgccgggtgcccaaaacatccgccagcagctggagcagttcgacgaacgcgaa
attgaccgcgttgaggccattgtccgttccatgacgccccatgagcgcgtggcccccaaa
atcatcaacggctcccgccgtgcccgcatcgcccgcggttccggcgtccacgtttccgag
gttaacggcctgctggagcgcttcgcgcaggcccagaagatgatgaagaaaatggcccaa
ggcgggatgccgggcatgcccgggatgcctggcttgcccggagccggcggcggtgcccgg
aaaaacgccaagaacgcgcccaagaagaaggccaagtccggaaacccggccaaggccgcc
caggagcgcaaggacgccgaggcccgccgggctaacgccgccaaggcgctgcccacgggc
gcggcctttggccagcaggcgggcgacttcgatccctcacagctgaacctgcccaagggc
ttcgacaagttcctcggcaaataa
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