Pseudarthrobacter quantipunctorum: WHH00_11035
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Entry
WHH00_11035 CDS
T10898
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pqa Pseudarthrobacter quantipunctorum
Pathway
pqa03030
DNA replication
pqa03430
Mismatch repair
pqa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WHH00_11035 (dnaE)
03430 Mismatch repair
WHH00_11035 (dnaE)
03440 Homologous recombination
WHH00_11035 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pqa03032
]
WHH00_11035 (dnaE)
03400 DNA repair and recombination proteins [BR:
pqa03400
]
WHH00_11035 (dnaE)
Enzymes [BR:
pqa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WHH00_11035 (dnaE)
DNA replication proteins [BR:
pqa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WHH00_11035 (dnaE)
DNA repair and recombination proteins [BR:
pqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WHH00_11035 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WXK91632
LinkDB
All DBs
Position
complement(2435254..2438811)
Genome browser
AA seq
1185 aa
AA seq
DB search
MTSSNDSFVHLHTHTEYSMLDGAARLGELFDETERLGMPALATTDHGYLFGAFDFWKKAT
DKGIKPIIGVEAYVTPGTARGDKSRVRWGEEHQRKDDISGGGSYTHMTLLSYNNVGMRNL
FRASSIASLDSVFGKWPRLDRELLNTYSEGLIATTGCPSGEVQTRLRLGQYREALEAAAE
FRDIFGAENYFCELMDHGLDIERRVTGDLLRLAKDLNLPLVATNDLHYTHEHDAKAHEAL
LAIQSGSTLLEPTYDNGGSRFAFSGSGYYLKSPQEMRELFRDHPEACDNTLLIAERCEVS
FNTDANYMPRFPCPPGEDETSWLVKEVDKGLQYRYPGGIPDEVRKQADYELGVITSMGFP
GYFLVVADFINWAKNNGIRVGPGRGSGAGSMVAYAMRITDLDPLRHGLIFERFLNPDRVS
MPDFDVDFDDRRRSEVIDYVTRKYGDERVAMIVTYGTIKTKQALKDSSRVLGYPFSMGEQ
LTKALPPAVMAKDIPLADIQNPEAKRYGEAGDFRQLIATDPEAAKVFETALGIEGLKRQW
GVHAAGVIMSSDPIIDVIPIMRRFQDGQVITQFDYPTSEGLGLIKMDFLGLRNLTIISDA
LENIKMNRGIDLDLENLELDDAPSYELLARGDTLGVFQLDGGPMRSLLKLMKPDNFEDIS
AVLALYRPGPMGANAHTDYALRKNGIQEVIPIHPELEEPLKEILGGTYGLIVYQEQVMAV
AQKLAGYSLGQADILRRAMGKKKKSELDKQFAGFSQGMQDNGYSMEAVKTLWDILLPFSD
YAFNKAHSAAYGVISYWTAYLKAHYAPEYMAALLTSVGDDKDKSAIYLNECRRMGITVLP
PDVNESALNFTPVGNDIRFGMGAIRNVGVNVVEAMVAARESEGAYTSFKDYLMKVPAVVC
NKRTIESLIKSGAFDSLGHHRRALAMIHEEAIDSVITLKRNEAIGQFDLFAGFDEAESES
SLSIEIPDLPEWEKKDKLSFERDMLGLYVSDHPLQGLEGLLSQHAEMSITSVLGEDGPQD
GAIITIAGMITSLSRRIAKASGNAYARAEVEDLGGSMEVMFFGQVYGPIASVLAEDLIVV
VKGRLQKRDDGAITLNCMELSVPDLSEGLNGPLVITMPTYKATEAVVTELGEVLRTHRGN
SEVRLHLQGDTRTEIMGLPVHLRVNPSPSLFGDLKVLLGPACLDA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccagcaatgactcgtttgtccatctccacacccacaccgagtactcgatgctg
gacggtgccgccaggctcggtgaactgttcgatgaaaccgagcggctggggatgcccgcc
ctcgccaccactgaccacggataccttttcggcgctttcgatttctggaagaaggccact
gacaaagggatcaaaccgatcatcggcgtcgaagcctatgtgactccgggaacggcccgc
ggtgacaagagccgcgtgcggtggggcgaggagcaccagcgcaaggacgacatttccggt
ggtggctcctacacccacatgacgctcctgagctacaacaacgtgggaatgcggaacctg
ttccgggcgtcctccatcgcctcccttgactccgtcttcggcaagtggccccggctggac
cgcgaactcctcaacacttattccgagggcctcatcgccaccaccggctgtccgtccggc
gaggtccagacacggctgcgcctgggccagtaccgcgaggcgctggaggctgcggccgag
ttccgggacatctttggtgcggagaactacttctgcgaactgatggaccacgggctggac
atcgaacgccgggtcacaggggacctgttgcggctcgcgaaggatctgaacctcccgctg
gtggccacgaacgacctccactacacgcacgagcacgacgccaaagcgcatgaggccctg
ctggccatccagtccggttccacgctgctggaacccacctacgacaacggcggttcgcgg
ttcgcgttctccggcagcggctactacctgaaatctccgcaggagatgcgggagctgttc
cgggaccaccccgaggcgtgcgacaacaccctcctcatcgccgaacgctgcgaggtgtcc
ttcaacacggacgccaactacatgccgcgcttcccctgcccgccgggggaggatgagacc
tcctggctggtcaaagaggtggacaaggggctccagtaccggtaccccggcgggattccg
gacgaggtccgcaagcaggccgactacgagctgggcgtcatcacctcgatgggtttcccg
ggctacttcctggtggtggccgacttcatcaactgggccaagaacaacggcatccgggta
ggtccgggccgtggttccggtgcaggctccatggtggcgtacgccatgcgcatcaccgac
ctcgatccgctgcgccatggcctgatcttcgagcgcttcctcaaccccgaccgtgtctcc
atgcccgactttgacgtcgacttcgatgaccggcgccgctccgaagtcatcgactacgtc
acccggaagtacggtgacgagcgcgtggcgatgatcgttacgtacggcaccatcaagacc
aagcaggcgctcaaggactcctcccgcgtgcttggctatcctttcagcatgggcgagcag
ctcaccaaggccctgccgcccgcggtcatggccaaggatattccgctggcggacatccag
aacccggaagccaagcgctacggcgaggcgggggatttcaggcagctgattgccaccgac
cccgaagctgcaaaggttttcgagaccgccctgggcatcgaaggcctgaagcgccagtgg
ggcgtgcatgccgccggcgtgatcatgtcctcggaccccatcatcgacgtcatccccatc
atgcgtcggttccaggacggccaggtgatcacccagttcgattaccccacgtccgagggc
ctcggcctgatcaagatggacttcctgggcctgcggaacctgacgatcatttccgatgcc
cttgagaacatcaagatgaaccgcggcatcgacctggacctggaaaaccttgaactggac
gacgccccgtcctacgagctcctggcccgcggcgacaccctgggcgtgttccagcttgac
ggcggacccatgcggtcgttgcttaagctcatgaagcctgacaacttcgaagacatctcc
gccgtgctggcgctctaccgtccgggccccatgggcgctaacgcccacactgactacgcg
ctgcgcaagaacgggatccaggaagtgatccccatccatccggaactggaggaacccctc
aaggagatcctcggcgggacctacggcctgatcgtgtaccaggaacaggttatggcggtg
gcgcagaagctggccgggtactcgctgggccaggcggacatcctccgccgcgccatgggc
aagaagaagaaatcggaactggacaagcagttcgccggtttctcccagggcatgcaggac
aacggctactcaatggaagccgtcaaaacgctgtgggacatcctgcttcccttctccgac
tacgccttcaacaaggcacactctgccgcgtacggcgtgatctcgtactggaccgcctac
ctcaaggcgcactacgcgccggagtacatggctgccctgctgacgtcggtgggggatgac
aaggacaagtcggcgatctaccttaacgagtgccgccgcatgggcatcaccgtgctgccg
ccggacgtcaatgagtccgcactgaacttcaccccggtgggcaacgacatccgcttcggc
atgggcgcaatccgcaacgtgggtgtgaacgtggtggaggccatggtggccgcccgcgaa
agcgagggcgcgtatacgtccttcaaggactacctgatgaaggtcccggcggtggtctgc
aacaagcggaccatcgaatcgctgatcaagtccggcgccttcgactccctgggccaccac
cgacgggccctggccatgatccatgaagaggccatcgactccgtcatcaccctcaagcgg
aacgaagcgatcgggcagttcgatctcttcgccgggttcgatgaagccgaatccgagtca
tcgctgagcatcgagatccccgacctgccggagtgggagaagaaggacaaactgtccttc
gaacgggacatgctcggactgtacgtctcggaccacccgctgcagggcctggagggactg
ctcagccagcacgcggagatgagcatcacctctgtccttggtgaagacgggccgcaggac
ggcgcgatcatcaccatcgcgggcatgatcacctcgctgagccggcgcatcgccaaagcc
agcggcaacgcgtacgcccgggcagaagttgaggacctgggcggttccatggaagtcatg
ttcttcggccaggtctacggacccatcgcctctgtcctggcggaggacctgatcgtggtg
gtcaagggacgcctgcagaaacgcgacgacggtgccatcaccctgaactgcatggagttg
tccgttcccgacctcagcgaggggctcaacggcccgctggtgatcaccatgcccacctac
aaagccaccgaggctgtggtcacggaactgggcgaggtgctccgcacgcaccgcggcaac
tccgaagtccgcctgcacctgcagggtgacacacggacggaaatcatgggtctgccggtc
cacctgcgcgtgaaccccagcccgtcactgttcggcgacctgaaggtgctgctcggcccg
gcctgcctggacgcctaa
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