Pseudarthrobacter quantipunctorum: WHH00_11245
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Entry
WHH00_11245 CDS
T10898
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pqa Pseudarthrobacter quantipunctorum
Pathway
pqa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WHH00_11245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqa03400
]
WHH00_11245
Enzymes [BR:
pqa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WHH00_11245
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WHH00_11245
DNA repair and recombination proteins [BR:
pqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WHH00_11245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Cys_rich_KTR
Ribosomal_S13
Zn_ribbon_8
NFACT_N
TniQ
Motif
Other DBs
NCBI-ProteinID:
WXK91672
LinkDB
All DBs
Position
2484092..2484961
Genome browser
AA seq
289 aa
AA seq
DB search
MPELPEVSGLAGFLADHLQGTVVSKVQIVSFAVLKTADPPFSSLEGRTVTGVRRFGKFIS
IDTGGVSFVFHLARAGWVRFTDSPTDAQLRMGKGHIAARLTFNGADGPRGFDLTEAGTKK
SLAVYVVRDPQEVPGIATLGPDPFTPAFDADMLAEILGSSSQQIKGLLRNQGVIAGIGNA
YSDEILHAARISPFATAKSLDRETVQVLYDAIHDVLGTALAEASGKPPKDLKDVKRSHMR
VHARTGQLCPVCGDTVREVSFADTALQYCPTCQTKGKILADRRTSKFLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctccccgaagtttccggcctggccggcttcctggccgaccatctgcaggga
accgttgtctccaaagtgcagatcgtatcctttgccgtcctcaagacagccgatcccccc
ttcagttcgctcgaaggcaggactgtgaccggcgtccggcgcttcgggaagttcataagc
atagatacgggcggagtttccttcgtcttccatctcgccagggcgggctgggtgcgcttc
acagattcccccaccgatgcccagttgcggatgggcaaggggcacatcgccgcgcgcctt
accttcaacggtgctgacggcccgcgcgggtttgatctgaccgaagccggcaccaagaag
agcctggcggtttatgtggtgcgggatccgcaggaagtgccgggcatcgcaacgctgggc
ccggacccgttcactccagcgttcgacgccgacatgctggctgagatcctcggctccagc
tcccagcagatcaaggggctcctgcggaaccagggcgtgatcgccggcatcggcaacgcc
tacagcgatgagatcctgcatgctgcccggatctcgccgttcgccacggccaaatccctg
gaccgggaaacggtccaggtcctgtacgacgccatccatgacgtcctgggcactgcactg
gcggaagcaagcggcaagccgccgaaggatctcaaggacgtgaaacggagccacatgcgc
gtccatgcccggaccgggcagctgtgcccggtgtgcggggacaccgtccgggaggtttcc
tttgcggacacagcccttcagtactgccccacctgccagacgaagggcaagatcctggca
gaccgcaggacctcgaagttcctcaaatag
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