KEGG   Pseudarthrobacter quantipunctorum: WHH00_11675
Entry
WHH00_11675       CDS       T10898                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pqa  Pseudarthrobacter quantipunctorum
Pathway
pqa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pqa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WHH00_11675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pqa03019]
    WHH00_11675
Messenger RNA biogenesis [BR:pqa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     WHH00_11675
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 DUF459
Other DBs
NCBI-ProteinID: WXK91752
UniProt: A0ABZ2QZZ5
LinkDB
Position
complement(2576790..2578481)
AA seq 563 aa
MTQTALTGLVTPPRLPQGTLRIVPLGGLGEIGRNMAVFEIDGKLLIVDCGVLFPEETQPG
VDLILPDFSYIEDRLDDVVAVVLTHGHEDHIGAVPYLLRRRNDIPLVGSQLTLALIEAKL
QEHRIRPYTLTVEEGQVEKFGPFECEFVAVNHSIPDALAVFIRTAGGTVLHTGDFKMDQL
PLDGRITDLRHFAKLGEEGVDLFMSDSTNADVPGFTTAEKEIGPTLERLFGQATKRIIVA
SFSSHVHRVQQVLDAAAKHNRKVAFVGRSMVRNMAIAEKLGYLDVPAGLIVDIKNIDNLP
DNRVVLMSTGSQGEPMAALSRMANGDHRVVVGDGDTVILASSLIPGNENAVFRIINGLLK
LGADVIHKGNAKVHVSGHAAAGELLYCYNILEPLNAMPVHGETRHLIANGKIAIESGVPE
ASVILADNGTVIDLKDHRADVVGQVEVGFIYVDGSSVGEITDADLKDRRILGDEGFISII
TVIHRATGKVVSGPEIHARGVAEDDSVFDDIIPKINAALEEAVLNHADHTSHQLQQVVRR
VVGTWVNRKLRRKPMIIPVVLEA
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgacccaaactgcccttaccggccttgtcacccctccccgcctgccgcagggaacgctc
cggattgttccgctgggcggactgggggagatcggccggaacatggccgtgttcgagatc
gacggcaagctgctgatcgtggactgcggcgtcctcttccccgaggaaacccagcccggc
gttgacctgatcctgcccgatttctcctacatcgaggaccggctggacgacgtcgtggcc
gtggtgcttacccacggacacgaagaccacatcggagccgttccgtacctgctccggcgc
cgcaacgacatcccgcttgtgggctcccagctcaccctcgccctgatcgaggcgaaactg
caggagcaccgcatccggccttacacgctcacggttgaggaagggcaggtggagaagttc
ggccccttcgaatgtgagttcgtggccgtcaaccactccattcccgacgccctggcggtg
ttcatccggacagccggcggcactgtgctgcacaccggcgacttcaagatggaccagctt
ccgctggatggacgcatcacggacctccgccacttcgccaagctcggcgaggaaggcgtg
gacctctttatgtccgactccaccaatgcggacgtcccgggattcaccactgccgaaaag
gaaatcggccccacgctggaacgtcttttcggccaggccaccaagcgcatcattgtcgcc
tccttctcctcgcacgtgcaccgggtccagcaggtcctggacgcagccgccaagcacaac
cgcaaagtggccttcgtgggccgctccatggtccgcaacatggccattgccgaaaaactt
ggctacctggatgtcccggcgggcctcatcgtcgacatcaagaacatcgacaacttgccg
gacaaccgcgtggtgctgatgtccaccggttcccagggcgagcccatggccgccctgtcc
cggatggccaacggtgaccaccgggtggtggtgggcgacggcgacaccgtcatcctcgcc
tcgagcctcatccccggcaacgagaacgccgtcttccggatcatcaacgggctgctgaag
ctgggcgccgacgtgatccacaagggcaacgccaaggtgcacgtctccggccacgccgcg
gcgggggagctcctgtactgctacaacatcctcgagccgctgaacgccatgccggtgcac
ggtgaaacccgccacctcatcgccaacggcaagatcgccatcgagtccggcgttcccgaa
gcaagcgtcatcctcgccgacaacggcacggtcatcgacctcaaggaccaccgggctgac
gtggtgggacaggtggaagtcggcttcatctacgtggacggctccagcgtgggcgagatc
accgacgccgacctcaaggaccgccggatcctcggtgacgaagggttcatctccatcatc
acggtcatccaccgggccaccggcaaggtggtgtccgggccggagatccacgcccgcggc
gtggcagaagatgattccgtcttcgacgacatcatccccaagatcaacgccgcgctggag
gaagccgtcctcaaccacgcggaccacaccagccaccagctccagcaggtggtccgccgc
gtggtgggcacctgggtcaaccgcaagctgcgccgcaagcccatgatcattcccgtggtg
ctcgaggcctaa

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