Pseudarthrobacter quantipunctorum: WHH00_19135
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Entry
WHH00_19135 CDS
T10898
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pqa Pseudarthrobacter quantipunctorum
Pathway
pqa00040
Pentose and glucuronate interconversions
pqa01100
Metabolic pathways
pqa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pqa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
WHH00_19135
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WHH00_19135
Enzymes [BR:
pqa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
WHH00_19135
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WXK93139
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Position
4200862..4202235
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AA seq
457 aa
AA seq
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MRHKKPLTPVPVVAALAVSLLAAPVPAFATPAPQADPTAQTARQPLERQVLPGNDGWAAA
GAGTTGGSAAGADRVYDVSSKAELLAAFASGGTDPKIIRVHGDITANVDANGSPVSCEDY
AAGTGYSLTQYLYDFDPARYGTTREPEGPQETARRAAAAQQAATIRWDIPSNTTIVGAGP
DSSITGAALRINRAENVIFRNLTVRDAADCFPAWDPTDGATGNWNSEYDLLQIVNGSTRV
WVDHNHFTDAPNLDSAQPTYFGRPYQVHDGAVDVTNGSDLVTMSYNRFSEHDKLLLIGST
DSATRGDVGKLRVTIHHNVFQNVGQRAPRVRYGQVDVYNNHFRTSADSEVPYGYTFGAGV
ESHLYAEANAFTIPADIPVSSLIAYFKGKVIATTGNAVNGKIVDLRAAYNAAAPADRQLG
SDDSWTPVLRTQVNAAQAIPALLADAVGPVFTAGEAD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcacaaaaagcccctcacacctgtgcctgtggtggcggcccttgccgtctcgctg
ctggcagcacccgtcccggcgttcgcaacgcccgcgccacaggcggacccaacagcccag
accgcccggcagccgctcgaacgccaggtgcttccgggcaacgacggctgggcggcggcg
ggtgccggcaccacgggcgggtccgccgccggcgctgaccgcgtgtacgacgtctccagc
aaagccgaactcctggctgccttcgcaagtggcggcacggatccgaagatcattcgggtc
cacggggatatcaccgccaacgtggacgcgaacggctctccggtcagttgcgaagactat
gctgccgggacaggctattcccttacccagtacctctacgatttcgatcccgcccggtat
ggaacaaccagggagcccgaggggccccaggaaactgcgcggcgcgcagcagcggcacaa
caggcagccaccatccgttgggatatccccagcaacaccaccatcgtgggagccgggccg
gacagcagcattaccggcgcagccctgaggatcaaccgggcagaaaacgtgattttccgg
aacctcacggtgcgggacgctgccgactgcttcccggcctgggacccgaccgatggcgcc
accggcaactggaacagcgagtatgacctgctgcagatcgtcaacggctccacccgcgtc
tgggttgaccataaccacttcaccgacgcccccaacctggacagcgcccagcccacctac
ttcggccggccgtaccaggtgcacgacggcgctgttgacgtcaccaacggctcggacctt
gtcaccatgtcctacaaccggttctccgagcacgacaagctcctgctcatcggatccacg
gactccgccaccaggggtgacgtgggaaagctgcgcgtaacgatccaccacaacgtgttc
cagaacgtgggccagcgcgcaccccgggtccggtacggccaggtggacgtctacaacaac
cacttcaggacctccgccgactccgaggtcccttacggatacaccttcggggcaggcgtg
gaatcacacctgtacgcggaagccaacgccttcaccattccggcagatatccccgtctcc
tcgctcatcgcgtatttcaaggggaaggtcatcgccaccaccggaaacgccgtcaacggc
aaaatcgtcgatcttcgggcagcgtacaacgcggccgctccggcggaccggcagctgggc
tccgacgacagctggacgccggtgctgcggacccaggtgaacgcggcccaagccattccc
gccctcctcgcggacgccgtcgggcccgttttcacggccggggaggctgactga
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