Pseudomonas quebecensis: OSC50_00135
Help
Entry
OSC50_00135 CDS
T10532
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pqe Pseudomonas quebecensis
Pathway
pqe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSC50_00135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pqe03019
]
OSC50_00135
Messenger RNA biogenesis [BR:
pqe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OSC50_00135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
UZW21417
UniProt:
A0ABY6QN72
LinkDB
All DBs
Position
27607..28086
Genome browser
AA seq
159 aa
AA seq
DB search
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
EREDVQILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLISNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggtttccgtcctaatgtcgggattattcttacgaatgatgccgga
caggtgctatgggctcgccgaatcaaccaagatgcctggcagtttcctcagggcggaatc
aaccccgacgaaacccctgaagacgccttgtaccgtgagttgaacgaagaagtcggcctt
gagcgtgaagatgtgcagattttggcctgtacccgtggctggttgcgctatcgtttgccg
caacgcctggtgcgtacccacagccaaccgctgtgcatcggccagaagcagaaatggttt
ctcctgcgcctgatctccaacgagcagcgggtgcggatggatttgaccggtaaaccggag
ttcgatggctggcgctgggtcagttattggtacccgttgggccaggtggtgacattcaag
cgcgaagtttatcgtcgcgctctcaaagagcttgccccgcgccttttagcgcgcgactga
DBGET
integrated database retrieval system