Pseudomonas quebecensis: OSC50_01140
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Entry
OSC50_01140 CDS
T10532
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pqe Pseudomonas quebecensis
Pathway
pqe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OSC50_01140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pqe03021
]
OSC50_01140
Transcription machinery [BR:
pqe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OSC50_01140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_31
HTH_24
HTH_29
Motif
Other DBs
NCBI-ProteinID:
UZW18996
UniProt:
A0ABY6QHS8
LinkDB
All DBs
Position
complement(239540..240058)
Genome browser
AA seq
172 aa
AA seq
DB search
MSSIQTPHSERVGALYRDHRGWLLAWLRRNVACPSRAEDLSQDTFMRLLGRDTLPEPREP
RAFLVAIAKGLLFDYFRRTALEQAYLAELMLIPESEHPSPEAQHLILEDLKAIDRLLGTL
SSKARAAFLYSRLDGLGHAQIAQRLGVSVPRVRQYLAQGIRQCYVALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtcgatccagaccccacacagtgagcgggttggtgcgttgtatcgcgaccatcgc
ggctggctgctggcctggttgcggcgcaacgtggcctgcccgagccgcgccgaagacctg
agccaggacacgttcatgcgcctgctgggtcgcgacacgttgccggaaccgcgcgagcca
agggcatttctggtggccatcgccaagggcctgctgttcgactatttccggcgcacggcg
ctggagcaggcttacctggccgagttgatgctgatcccggaaagcgaacacccctcaccc
gaagcccagcacctgatcctcgaagacctcaaggccatcgaccgtctgcttggcacactg
tcgagcaaggctcgcgcggcgtttctctacagccgcctcgacggtctcggccatgcgcag
atcgcccagcgcctcggcgtgtcggtgccgcgcgtgcgccagtacctggcccagggcatt
cgccagtgctacgtcgcgctgtatggcgagccgacatga
DBGET
integrated database retrieval system