Pseudomonas quebecensis: OSC50_01720
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Entry
OSC50_01720 CDS
T10532
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pqe Pseudomonas quebecensis
Pathway
pqe03020
RNA polymerase
Brite
Enzymes [BR:
pqe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OSC50_01720 (rpoC)
Transcription machinery [BR:
pqe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OSC50_01720 (rpoC)
DNA repair and recombination proteins [BR:
pqe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OSC50_01720 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UZW19099
LinkDB
All DBs
Position
364711..368910
Genome browser
AA seq
1399 aa
AA seq
DB search
MKDLLNLLKNQGQVEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMAHIELASPVAHIWFLKSL
PSRIGLLMDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM
GAEAVRELLHAIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFQGSGNLPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIFGKLEMRGLATTIKAAKKMVERELPEVWDVLAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREAINAKGEGRVFADLQEVDRVFRAG
EAALHAKVKVRINETVNDRDGGSVTNTRIVDTTVGRALLYQVVPKGLSYDVVNLPMKKKA
ISKLINQCYRVVGLKETVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIIGAATDE
VKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVIDRHGDEVDQESFN
SMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLSVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEIDCGTEHGLLMTPHIEGGDVVEPLGERVL
GRVIARDVFKPGTEEVIVPAGTLVDEKWVEFIELNSIDEVIVRSPISCETRYGICAKCYG
RDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADSVQVKNGGTVRL
HNLKHVERVDGHLVAVSRSGELAIADDYGRERERYKLPYGAVISVKEGDKVDAGAIVAKW
DPHTHPIVTEMKGTVTYVGMEEGITIKRQTDELTGMTNIEVLDAKDRPAAGKDIRPAVKM
VDDNGKDLLLPGTDVIAQYFLPANALVGVADGAKIAIGDVIARIPQETSKTRDITGGLPR
VADLFEARRPKEASILAEVSGTIAFGKETKGKRRLVITPNDGSDPYEELIPKWRHLNVFE
GEQVNRGEVISDGPSDPHDILRLLGVSALAKYIVNEIQDVYRLQGVKINDKHIETILRQM
LRKVEIAESGDSSFIKGDQMELTHVLVENERLAAEDKFVSKFTRVLLGITKASLSTESFI
SAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLAYHSERKRRRDADKPLR
VSASEVEAALTEALNSSGN
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacctactgaatttgctgaaaaaccagggtcaagtcgaagagttcgacgccatc
cgtattgggttggcatcgcctgagatgatccgttcgtggtcgttcggtgaagttaaaaag
ccggaaaccattaactaccgtacgttcaaacctgagcgtgacggcctgttctgcgccaag
atctttggcccggtaaaggattacgagtgcctgtgcggtaagtacaagcgcttgaagcac
cgtggtgtgatctgcgagaagtgcggcgttgaagttgcgctggccaaggttcgtcgtgag
cgcatggcgcacatcgagctggcttcgccggttgcccacatctggttcctgaaatcgctg
ccgtcccgtatcggcttgctgatggacatgaccctgcgtgatatcgagcgcgttctctac
ttcgagagctatgtcgttatcgatccgggtatgaccacccttgaaaagggtcagctgctg
aacgatgagcaatacttcgaagcgctggaagagttcggcgacgatttcgatgcccgcatg
ggcgccgaagctgtgcgcgaactcctgcacgctatcgacctggagcacgagattggccgc
ctgcgcgaagaaattccgcaaaccaactccgaaaccaaaatcaagaaactgtccaagcgt
ctgaagttgatggaagccttccagggttccggcaacttgccagagtggatggtgctgacc
gttctgccggttctgccgccggatctgcgtccgctggtaccgttggatggtggtcgtttc
gcgacgtccgacctcaacgacctgtaccgccgcgtgatcaaccgtaacaaccgcttgaag
cgcctgcttgatctgtccgctcctgacatcatcgtgcgcaacgaaaagcgtatgttgcaa
gaggccgtcgatgctctgctcgacaacggtcgtcgtggccgcgctatcaccggttcgaac
aagcgtcctctgaaatccctggctgacatgatcaagggtaagcaaggtcgtttccgtcag
aacttgctcggtaagcgtgttgactactccggtcgttcggtaattaccgtaggcccgacc
ctgcgtctgcaccagtgcggtctgcctaagaaaatggcgcttgaactattcaagccgttc
atcttcggcaagctggaaatgcgcggcctcgcaaccaccatcaaagcggccaagaaaatg
gtcgagcgcgaactgccagaggtttgggacgttctcgctgaagtgattcgcgaacacccg
gttctcctcaaccgtgcaccgacccttcaccgtctgggtatccaggcgtttgaaccggtg
ctgatcgaaggtaaggctatccagctgcaccctctggtctgtgctgcgtacaacgccgac
ttcgacggcgaccaaatggccgtgcacgtaccgctgaccctggaagcccagctggaagcg
cgtgcgttgatgatgtcgaccaacaacattctgtcgccagccaacggtgagccaatcatc
gttccgtcgcaggacgttgtattgggtctgtactacatgactcgtgaagcgatcaacgcc
aaaggcgaaggtcgtgtgttcgctgacctgcaggaagttgaccgtgtgttccgtgccggc
gaagccgcactgcacgccaaggttaaagtgcggatcaacgaaaccgtcaacgaccgtgat
ggcggcagcgtgaccaacacccgtatcgtcgacaccactgtcggccgtgcgctgttgtat
caggttgtgccaaaaggcctgtcgtacgatgtcgtcaacctgccaatgaagaaaaaggcg
atctccaagctgatcaaccagtgctaccgcgtggttggtttgaaagagaccgtgatcttc
gctgaccagttgatgtacaccggttttgcttattcgaccatttccggcgtttccatcggt
gttaacgacttcgttatcccggatgaaaaagcccgcatcatcggtgcagccaccgacgaa
gtgaaagagatcgaaagccagtacgcctccggcctggtaacccagggcgagaagtacaac
aaggtgatcgacctttggtccaaggccaacgatgaagtttccaaggcgatgatggccaac
ctctcgaaagagaaagtcatcgaccgtcacggcgacgaagttgaccaagagtccttcaac
tcgatgtacatgatggccgactcgggcgcacggggttctgctgcgcagatccgtcagctc
gccggtatgcgtggtctgatggccaagccggacggttccatcatcgaaacgccgattacc
gcgaacttccgtgaagggttgagcgtacttcagtacttcatctcgactcacggtgctcgt
aaaggtctggcggataccgcgttgaaaaccgctaactccggttacctgacccgtcgtctg
gtagacgttgcacaagatctggtggttaccgagatcgattgcggcaccgagcacggcctg
ctgatgactccgcacattgaaggcggcgacgttgtagagccgctgggtgagcgcgtattg
ggtcgtgtcattgcccgcgacgtattcaaaccaggcaccgaggaagttatcgttcctgcc
ggcaccctggttgacgagaagtgggttgagttcatcgagctcaacagcatcgacgaagtg
attgttcgctcgccgatcagctgcgaaacccgctacggcatttgcgccaagtgctacggc
cgtgacttggctcgtggtcaccaggtgaacatcggtgaagcggtcggcgttatcgctgcc
cagtccatcggtgagccgggtactcagctgaccatgcgtacgttccacatcggtggtgcg
gcaagccggacctccgcggctgacagcgttcaggtgaagaatggcggtaccgtccgtctg
cacaacctcaagcacgttgagcgagtggatggccatctggtcgctgtgtcccgttccggt
gagctggcgattgctgatgactacggtcgtgagcgtgagcgttacaagctgccgtacggt
gctgtgatttcggttaaagagggtgacaaggtcgacgctggcgcaatcgtggccaagtgg
gatccgcacactcacccaatcgttaccgaaatgaaaggtaccgtgacctacgtgggcatg
gaagaaggcatcacgatcaagcgtcagactgacgaattgaccggtatgaccaacattgaa
gtcctcgacgcgaaggatcgtccagctgccggtaaagacatccgtcctgccgtgaagatg
gtcgatgacaacggtaaggatctgttgctgccaggcactgacgtaatcgctcagtacttc
ctgccagccaacgcccttgtcggtgtagcggatggtgcgaagatcgccatcggtgacgtt
atcgcgcgtatcccgcaagagacttcgaagacccgtgacatcaccggtggtctgccgcgt
gttgccgacttgttcgaagctcgtcgtccgaaggaagcgtcgattctggctgaagtcagc
ggcaccatcgcgttcggtaaagagaccaaaggcaagcgccgtctggtcattactccgaac
gacggtagtgatccgtacgaagagctgattccgaagtggcgtcacctcaacgtcttcgaa
ggcgaacaggtaaaccgcggcgaagttatctctgacggtccaagcgacccacacgacatc
ctgcgtctgctgggtgtgagtgcgctggccaagtacatcgttaacgagatccaggacgtt
taccgtctgcagggtgtgaagatcaacgataagcacatcgagaccatcctgcgtcagatg
ctgcgtaaagttgaaatcgctgaatccggcgattcgagtttcatcaagggcgaccagatg
gaattgactcacgtactggtagaaaacgagcgccttgcagcggaagacaagtttgtctcc
aagtttacccgtgtgttgctgggtatcactaaggcgtcgttgtccactgagtcgttcatc
tcggcggcctccttccaggagaccactcgcgtactgaccgaagcagcggtaaccggcaag
cgcgattacctgcgcggcctgaaagagaacgtggtcgtgggtcgtctgatcccggctggt
accggtttggcttatcacagcgaacgtaagcgtcgccgtgatgctgacaagccgttgcgc
gtaagcgccagtgaagtggaagctgcactgaccgaagcgctgaactcaagcggtaactga
DBGET
integrated database retrieval system
