Pseudomonas quebecensis: OSC50_02500
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Entry
OSC50_02500 CDS
T10532
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pqe Pseudomonas quebecensis
Pathway
pqe03030
DNA replication
pqe03430
Mismatch repair
pqe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OSC50_02500
03430 Mismatch repair
OSC50_02500
03440 Homologous recombination
OSC50_02500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pqe03032
]
OSC50_02500
03400 DNA repair and recombination proteins [BR:
pqe03400
]
OSC50_02500
Enzymes [BR:
pqe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OSC50_02500
DNA replication proteins [BR:
pqe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OSC50_02500
DNA repair and recombination proteins [BR:
pqe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OSC50_02500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Ribosomal_L26
Motif
Other DBs
NCBI-ProteinID:
UZW19246
UniProt:
A0ABY6QHX6
LinkDB
All DBs
Position
516368..516979
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGITPSSQCRATEIAVVILERGHIVDRYQSLMNAGVRVPGFIEQLTGIS
TAMLRSAPPAERVMNEVNEFVGITPLLAHNAAFDQKFWDYELGLIRRTRLQKFACSLLLA
RRLMPSAPNHKLGTLNAFAQLPHTGKAHRALADAEMAANLTAHLAQELRRTHGLRELSHD
LLCTLQKVPAAKINEHLKKHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatcaccccgagcagccagtgc
cgggccacggaaattgccgtggtcatccttgagcgcgggcacatcgtcgaccgctaccag
agcctgatgaatgccggcgtgcgcgtgccgggctttatcgaacaactgaccggcatcagc
accgccatgttgcgcagcgcaccaccggccgagcgggtgatgaacgaagtcaacgagttc
gtcggcatcacgccgctgctggcgcacaacgccgcattcgaccagaaattctgggactac
gaactgggcctgatccgccgcacccgcctgcagaaattcgcctgttccctgctgctggcc
cgccgcctgatgccctcggcacccaaccataagctcggcaccttgaatgctttcgctcaa
ctgcctcataccggcaaggctcaccgtgcattggcggacgcggaaatggccgccaacctg
acggcgcatttggcccaggaactgcgacgtacccatggcctgcgcgaactgtcccacgac
ctgctgtgcaccttgcagaaggtgccggcggcgaagatcaatgagcatttaaagaagcat
cgcgggttctga
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