Pseudomonas quebecensis: OSC50_03175
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Entry
OSC50_03175 CDS
T10532
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pqe Pseudomonas quebecensis
Pathway
pqe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OSC50_03175 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqe03400
]
OSC50_03175 (recC)
Enzymes [BR:
pqe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OSC50_03175 (recC)
DNA repair and recombination proteins [BR:
pqe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OSC50_03175 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
RIH_assoc
Motif
Other DBs
NCBI-ProteinID:
UZW19366
LinkDB
All DBs
Position
665356..668808
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AA seq
1150 aa
AA seq
DB search
MPDAESLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPEL
INQPHFEPLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE
TKPLNPANCWQAELWRALLVDVGEEGMSESRAGVHQRFIERINSLEQAPSGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKTGMPISI
DPQTLHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSDSEPTTLLNQL
QDDILELRPLNETRALWPAVDLQRDTSIRFHIAHSAQREVEVLHDQLLHRFSADATLRPR
DIIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAQQRASLGLPAELEQNS
WRFGLRRMLLGYAVGSGAACEGIEPYDEIGGLDAALIGPLVALLDALSDAHQALSEPTTP
QQWGERLQRLMQRFFLASSEHDDFLLSQLEQLRETWLETCESVGLQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWKHAT
SDEPLIDALTQEHPLQPFSARYFHAGDPLFSYAREWQLLHEATSTAAPEPELTQHQQEEP
LSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYNLSDSLLNAALSQ
PDHLDQALKAQAQRLQGSGLLPMVGFGECLRNELIEPLPDLLQRYQQLLALWPTPHTAAE
PVSFEHQGIRLEGWVSGLHRRSDGGLLSVSTIPNSIGSIKTRKWHRLIRPWVNHVVGCAC
GLPLSTGLVASDDTLLLAPLAPALAQDILGNLLLAWHSGMRKPLPVAVKTAFAWLGQTDP
AKAHAAASKAYEGDGLTTDGERRESPALTRQFPDYAALTASEEFEGWCEALYRPMINAPW
RSLTGEEAGA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgcggagtccctcagcgctggattcatggtggttcacggtaaccgcttggat
gagctgcgcagcctggtggtgagctggatgcgccggtatcccctcgcgcccctggaaaac
gaaattgcgttggtacaaagcaacggtatcgcccagtggctcaaactggcgctggctgaa
gatccagaagatgacgacatgggcggctgcggcattgccgccgccattgatgtgcaactt
cctggcagttttatgtggcagctctatcgcatggttctgggccgcgatgaaatcccgccc
aaatccctgctcgacaaagccccactcacttggcgccttatgcgcctgctgccggaactg
atcaaccaaccacacttcgaaccgttgcagcgcttcctcacccacgacaccgacctgcgt
aagcgctatcaattggctgagcgcctggctgacctgtttgaccaatatcaggtttaccgt
gctgactggctggaggattgggccgccggccgccatcaacttcgcaacgggcgaggtgaa
accaaacccctgaacccggcgaactgctggcaagcagaattgtggcgtgcattgctggtg
gacgttggggaagagggtatgtctgaaagccgtgccggcgtgcaccagcgcttcatcgag
cggatcaattcgcttgagcaggccccgtccggcctgccttcacgagtcattgttttcggc
atctcttccttgccggcccaggctcttgaagcactcgccgggttggctcgtttcagtcag
gtcctgctgtgcgtacacaacccctgtcgccatcattggtccgacatcgtcgccgacaaa
gacctgcttcgtaacgaatacaaaaggcaggcgcgcaagaccggcatgcccatcagtatc
gacccgcaaaccctgcaccagcacgcccatccgttgttggccgcctggggcaaacagggg
cgcgactacataagcctgctggacagttacgacgaccctaacagctaccgcgccgcattc
cgcgatggacgcatagacctgttcagcgacagtgagcccaccacgctgctcaatcagttg
caggacgatatcctcgaactgcgcccgctcaatgaaacccgcgctctatggcccgctgtc
gacctgcagcgtgacacgtcaatccgcttccacatcgcccacagcgctcaacgcgaagtc
gaagtgctccacgaccaactgctgcaccgcttcagtgccgacgccacgctgcgacctcgg
gacatcatcgtcatggtcccggatgtcgacagctacgcgccgcacattcgcgccgtgttc
ggccaactcgagcgcaatgatccgcgcttcatcccattcaccttgaccgaccagggacaa
cgtggacgcgaccctctgctgatcgccgtggagcacttgctcaaactccccgacagccgc
tttcctgtcagcgaaattcttgatctgctcgacgtgcccgccctgcgcgaacgctttgcg
atcaaagagcgcgacttgccgacgctgcaccgctggatcgaaggcgccggcattcgctgg
gggctcaacgcgcaacaacgtgccagcctgggcctgcccgctgagcttgagcagaacagc
tggcgattcgggctgcgccgcatgttgctgggatacgcagtcggtagcggtgcggcctgc
gaaggtattgagccctacgatgagatcggcggtcttgatgccgcgctgatcggcccgctg
gtcgcgttgctcgatgcactgagtgatgctcaccaggccttgtccgaaccgactactccc
caacaatggggcgaacgcctgcaacgcttgatgcagcggttcttcctggccagcagcgaa
catgatgactttctcctgagccaacttgagcaactgcgggaaacctggctcgaaacctgc
gagtccgtcggtctgcaggatgagttaccactcaccgtggtccgtgaagcctggctggcc
ggtctggaccagggccggttgtctcagcgttttcttgccggcgctgtcaatttctgcacc
ctgatgccgatgcgcgctatccccttcaaactcgtctgtctgctgggtatgaacgatggc
gattacccccgtgcgcagccgccactggacttcgacctgatgggcagcgattaccgccct
ggcgaccgatcgcgccgcgaagatgaccgttacctgctgctcgaggccctgctctcggcc
cgcgaccagctctacatcagttgggtcggccgtagcatccgagacaatagtgagcgtccg
gcttcggtgctgatcggccagctgcgcgatcatctcgccagcggttggaagcacgcaaca
agtgacgaaccgctcatcgacgccctgactcaggaacaccccttgcagcccttcagcgcc
cgctatttccacgcgggcgatccattgttcagctacgcccgtgaatggcagctgctgcac
gaggccacatccactgccgcgccggagcccgagctgacgcaacaccagcaagaagaaccg
ctaagcctcggtcagttgcaggatttcctgcgcaacccggtcaagcacttcttcagtcag
cgcctgaaagtattctttgaggccgccgaagttccgctcgccgatgaagaaccttttgtc
ctggacgccctgcaacgctacaacctgagcgacagcctgctcaatgctgcactgagccag
ccggatcacctcgaccaggcgctcaaggcccaggcccagcgtctgcagggcagtggtctg
ttgcccatggttggtttcggcgagtgcctgcgcaacgaactgatcgagcccttgcccgat
ctgctgcaacgctaccagcaattgctggccctatggccaactcctcacaccgctgccgaa
ccggtcagttttgagcatcaagggatcaggctcgaaggctgggtcagcggcctgcatcgg
cgcagtgatggcggattgctcagcgtgagcaccatcccgaacagcatcggctcgatcaag
acgcgcaagtggcatcgtctgatccgcccttgggtcaatcacgtggtgggctgcgcctgc
ggactgcccttgagtactggcctggtggccagcgacgacaccttactcctggctccgctg
gccccggcgctcgcccaggacatcctcggcaacctgctcctggcctggcacagcggtatg
cgcaagccactgccggtggccgtcaagaccgcatttgcgtggctgggccaaaccgatccg
gccaaagcccatgccgcggcgagcaaggcctatgaaggcgacggcctgaccaccgacggc
gaacggagagagagccctgcgctcacgcgccaattcccggactacgcagcgctaacggcc
agcgaagaattcgagggttggtgcgaagcgctctatcgaccgatgatcaatgcgccgtgg
cgatcactcactggcgaggaggccggcgcatga
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integrated database retrieval system
