Pseudomonas quebecensis: OSC50_09905
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Entry
OSC50_09905 CDS
T10532
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pqe Pseudomonas quebecensis
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pqe01002
]
OSC50_09905
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pqe01011
]
OSC50_09905
Peptidases and inhibitors [BR:
pqe01002
]
Cysteine peptidases
Family C82
OSC50_09905
Peptidoglycan biosynthesis and degradation proteins [BR:
pqe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
OSC50_09905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UZW20627
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Position
2101271..2102872
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AA seq
533 aa
AA seq
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MFKKHACYLSICLLVAPLVATADALPVEPLPVTTPAPVDLAPVQQALAQLPSVCPGLAPQ
IDAAAQGRLQAFYQQQGDVALWSDEARRQALHAQLQLLADDGLDPSHYSLPAVDATANVL
CSDIDSSRHYLQALQDLHYGRLQQSRFEPLWHSQPPARDPDVEVLALAAVGLQDMAQAFD
QARPGADLYRSLRNAYASVRLQPLPHWDAVGSGPLLRPGMEDTRVPQLARRLYDGGYLAA
EPQGVGKQYRAELVDAVKAFQLSHSLQADGVIGAGTVAELNISPAVRREQLRINLERFRW
LAQDLEPEGVLVNVAAAQLSVYQSGIPVWQTRLQVGRAERQTPLLKSRITRLTLNPTWTI
PPTIMREDKLPAIRLNPEYLRQQNLQVLDAQGQPLAPEQIDWAHPGNILLRQEAGPRNPL
GKIVMRFPNPYSVYLHDTPSQPLFTKGPRAFSSGCVRVEQPLLLRDLLVSPAERARTDEL
LATGVTHEFRLATPVPVLLGYWTVEVDRQGGLVYAPDIYGRDLVLMKAMGSVL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaaacacgcatgttacttgagcatttgcttgctcgttgcaccattggtcgcc
acggccgacgcgctgccggtcgagcccttgccggtgacgacgccggcaccggtcgacctg
gcgcccgtgcagcaggcgctggcgcagttgcccagtgtctgccccggccttgcgccgcag
atcgacgccgccgcacaggggcgcctgcaagccttttatcagcagcaaggtgatgtcgcg
ttgtggtccgacgaagcccgtcgccaagccttgcacgcccaactgcaactgctcgccgac
gacggcctggacccttcccactatagcctgcctgccgtggatgccacggctaacgtgctg
tgcagcgatatcgacagcagccgccactacctgcaggccctgcaggacctgcactacgga
cgattgcagcaatcacgcttcgaaccgctgtggcattcccagccgcctgcccgcgacccc
gacgttgaagtgctcgcccttgctgcggtgggcctgcaggacatggcccaggcgttcgat
caagcgcgccccggcgccgatctgtatcgcagcctgcgtaatgcctatgcgagcgtgcgc
ctgcaaccgttgccgcattgggacgccgtgggcagtggcccgttgttgcgccccggcatg
gaagacacgcgggtgccgcagctggcacggcgtctctacgacggcggctacctggccgct
gagccccagggcgtcggcaagcaataccgcgctgagctggtagatgcggtcaaagccttt
cagctcagccattcattgcaggccgatggcgtgatcggtgccggcacggtagccgagctt
aatatcagcccggcggtgcgtcgcgagcagttgcgcatcaacctcgaacgcttccgctgg
ctggcccaggacctggagcccgaaggcgtgctggtcaacgtcgccgcggcacaactgagc
gtctatcagagcggcatccccgtgtggcaaacccgtctgcaagtgggccgcgccgagcgc
cagacaccgttgctcaaatcgcgcatcacccggctgacgctcaaccccacctggaccatc
ccgcccacgattatgcgcgaggacaaacttccggccattcgcctcaatcccgaatacctg
cgccagcagaacctgcaggtgctcgacgcccaaggccagccgctggccccggaacagatc
gactgggcacaccccggcaacatcctgctgcgccaggaagccggcccacgcaatccgctg
ggcaaaatcgtgatgcgctttcccaacccctactcggtgtacctgcacgacacccccagc
cagccgctgttcaccaagggcccgcgcgcgttcagctccggctgcgtgcgggttgaacaa
ccgttgctgctgcgcgacctgctggtcagtcctgccgagcgcgctcgcaccgacgaactg
ctggccaccggcgtgacccatgaattccgcctggctaccccggtgccggtactgctgggc
tattggacagtggaagtggaccgccagggcggcctggtgtacgcgccggatatctacggg
cgggacctggtgctgatgaaggcgatgggcagcgtgctctga
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