Pseudomonas quebecensis: OSC50_10315
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Entry
OSC50_10315 CDS
T10532
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pqe Pseudomonas quebecensis
Pathway
pqe02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
OSC50_10315 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pqe02044
]
OSC50_10315 (tssC)
Secretion system [BR:
pqe02044
]
Type VI secretion system
Imp/Vas secretion system core components
OSC50_10315 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
UZW20705
UniProt:
A0ABY6QM17
LinkDB
All DBs
Position
2191579..2193054
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AA seq
491 aa
AA seq
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MNTQHTQTVAHAAQEHGILDNIIAQTLLSADDEAYGIAKRGVSAFIEELIKPHNSGEPVK
KRLVDRMIAEIDAKLSLQMDEILHHPEFQALESSWKGLQLLVDRTNFRENIKIELLNVSR
QDLLDDFEDSPEVTQSGLYKHIYSAEYGQFGGQPVGAVIANYFLSPSAPDVKLMQYAASV
ACMAHAPFIASAGPGFFGLESFTGLPDLKDLRDHFEGPQFAKWQSFRESEDSRYIGLTVP
RFLLRTPYDPLECPVKTFAYRENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGAVEDLPLHHFQSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA
SSVQKPKHFGISTEGREAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVEGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccaacacactcaaaccgttgcccacgccgctcaagagcacggcattctcgac
aacatcattgcccagacattgttgagcgcggacgacgaagcctatggcattgccaagcgt
ggcgtctcagcctttatcgaagaattgatcaagccgcacaacagcggcgagccggtgaaa
aaacgcctggttgatcgaatgatcgccgaaatcgacgcgaagctcagcctgcaaatggac
gagatcctgcaccacccggagttccaggccctggaatcgtcgtggaagggtttgcagttg
ctggtcgaccgcaccaattttcgcgaaaacatcaagatcgaactgctgaacgtttcacgt
caggacctgctggatgactttgaagattctccggaggtgacgcagtccgggctctacaaa
cacatttacagcgccgagtacggtcagttcggcggccagcccgtgggcgccgtcatcgcc
aactacttcctctctcccagcgcgcccgatgtgaaactcatgcagtacgccgccagtgtg
gcctgcatggctcatgcgccgtttatcgcgtctgccggcccgggtttcttcggattggag
agcttcacgggcctgcctgacctcaaggatctcagggaccatttcgaggggccgcagttt
gccaagtggcaaagctttcgcgagagcgaagattcgcgctatatcggcttgaccgtaccg
cgcttcctgttgcgcacgccttacgaccccctggaatgcccggtcaagacctttgcttac
cgggaaaacgtggtgaacagccacgaacattacctgtggggcaataccgcctatgccttc
gccacgcgccttaccgacagctttgcacggtttcgctggtgcccgaacatcatcggcccg
caaagcggcggtgcagtggaagacttgcctctgcatcacttccagagcatgggcgagatc
gaaaccaagattcctaccgaagtgctggtgtccgaccgccgtgaatatgagctggcgcaa
gaaggctttattgccctgacgatgcgcaagggcagtgacaatgctgcgtttttttccgcc
agctccgtacagaaacccaaacatttcggcatcagtaccgagggcagggaggcggagctg
aattaccggctgggcacccagttgccgtacatgatggtggtcaaccgtctggcgcattac
ctcaaggttctacagcgcgagcaattgggttcctggaaggagcgcaccgaccttgagctg
gaactcaacaagtggattcgtcagtacgtcgccgatcaggaaaaccccagcgccgaagtc
cgtggacggcgcccgctgcgtgcggcgcgtattgtcgtcagtgatgtggaaggcgaaccg
ggctggtaccgcgtcaacctgagcgtgcgaccgcacttcaaatacatgggggccgatttc
accttgtccctcgtcggcaagctcgacaaagaatga
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