Pseudomonas quebecensis: OSC50_10335
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Entry
OSC50_10335 CDS
T10532
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pqe Pseudomonas quebecensis
Pathway
pqe02025
Biofilm formation - Pseudomonas aeruginosa
pqe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OSC50_10335 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
OSC50_10335 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pqe02044
]
OSC50_10335 (tssH)
Secretion system [BR:
pqe02044
]
Type VI secretion system
Imp/Vas secretion system core components
OSC50_10335 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_16
ClpB_D2-small
AAA_22
TniB
AAA_7
NACHT
nSTAND3
IstB_IS21
AAA_25
Sigma54_activat
T2SSE
NBD_SMAX1
Hpr_kinase_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UZW20709
LinkDB
All DBs
Position
2196233..2198788
Genome browser
AA seq
851 aa
AA seq
DB search
MMNVDLQQLIRALNPQARRDLERSAERCVTRGGGEVLVEDLLGVLLEHREGLLIKALADA
EVDSAELAATLRPRIETSASPNPVFAKGLVQWLQNALMVAHLELHQTEVDHAALLLALLC
HPPQPEGCAYQRVLSRLDAQRVREFAASRKVEGVPASDGESCLSRFTHDLTRQAHEGRID
PVLCRDGEIRQLIDILARRRKNNPILVGEAGVGKTAVVEGLALRIATDQVPEPLRNARVL
TLDMGMLQAGASLKGEFERRLKGVMDEVNASPQAVILFIDEAHTLVGAGAQAGGADAANL
LKPALARGELRTIAATTWSEYKRYFEKDPALARRFQPVKVGEPSVEEAVSILRGLVPVHE
ASHGVYVRDDAVVAAACLSARYLAGRQLPDKAVDVLDTACARARISRVCAPESLQRLGAQ
KAECMRQRLSLLRDTGAGLPMDAQALRALERRLAAVEHAYQQLQARWLEEQACAQQVLAL
RQQLDDARQAGQDVDALEQVLAEQRARQGAHPLVHLEVCPRLVAQVVSAWTGIPVERLAV
EHSETVLGFADALRSRILGQEHAVQALDRNLRAVAAGLNTPDAPVGVFLLVGPSGVGKTE
TAMALGDLLYGGERFVTILNMAEYQEKHALSRLIGAPPGYVGYGEGGVLTEAVRQRPYSV
VLLDEVEKADPDVLNLFYQIFDKGLANDGEGREIDFRNTLILMTSNLGSECITKLCAGAQ
RPDPQVLQAAIYPMLRDYFKPALLARMRVVPYYPIAGDVLHDLARLKLERLGCRLQLRRL
SFSYTDDLVKHMAERCSHSDSGARYIDQWIDSCLLPQMVDRLLETMAVGESVARVHAGLD
ANAQPICEFSQ
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgtagacctgcaacaactgatccgcgcattgaatccccaggcgcggcgagac
ttggaacgttcagccgagcgttgcgtgacgcgcggaggcggcgaggttcttgtagaggat
ctgctgggcgtcctgctggaacaccgcgaaggcctgttgatcaaggcactggctgacgcc
gaggttgacagcgctgaactggcagccacgctgcggccaaggattgaaacgagtgcttcg
cctaatccggtgttcgccaagggcctggtgcaatggttgcaaaacgcgttgatggtcgcc
catctggagttgcatcaaaccgaggtggaccatgccgcgctgttgttggcgttgttgtgt
cacccgccacagcctgaaggttgcgcttatcaacgcgtgctgagccgcctggatgcgcag
cgcgtgcgcgagtttgctgcaagtcggaaggtggagggcgtcccggcaagcgatggtgag
tcgtgcctgtcacggttcacccacgatctgacccggcaggcccatgaaggccggatcgat
ccggtgctgtgtcgcgatggcgagattcgccaactgatcgatatccttgcgcgacgacgc
aagaacaacccgatcctcgttggcgaagccggcgtaggcaaaacagccgtggtcgagggg
cttgccttgcggatcgccaccgatcaggtgccggaaccgctcagaaacgcacgggtgctg
accctggacatgggcatgctgcaggccggagccagtctcaagggcgaattcgaacggcgc
ctcaagggcgtgatggatgaggtcaacgcctcgccacaagcggtcattctgtttatcgac
gaagcgcatacgctggtgggcgcgggtgcccaggcgggtggcgccgatgcggccaacctg
ctcaagccggcgctggcccgaggtgagttgcgcactatcgccgccaccacctggtcggaa
tacaaacgttacttcgagaaagaccccgccctggcccggcgctttcaaccggtcaaggtc
ggcgagccgagtgttgaggaggcggtttcgatcctgcgtggcctggtgccggtgcatgaa
gccagccatggcgtctatgtacgtgacgacgccgtggtggccgccgcctgcctgagtgcc
cgctacctcgctgggcgccagttgcccgacaaggccgtggacgtactggataccgcctgt
gcccgtgcacgcatcagccgggtctgcgcccccgagtcgctgcagcggctgggtgcgcag
aaggctgaatgtatgcgacagcgtctgtcgctgttgcgagacacaggcgcagggttgccg
atggatgcgcaggcattgcgcgcgctggaacggcgactggcggctgtcgagcacgcgtac
caacagttacaagcacgttggcttgaagagcaggcgtgcgcgcaacaggtacttgcactg
cgacagcaattggacgatgcccgccaggcagggcaggacgtggatgccctggaacaggtg
ctggcagaacagcgtgcccgacagggcgcacatcccctggttcatctcgaggtgtgtccg
cgcctggtggcccaggtcgtcagcgcctggacaggtattccggttgaacgcctggcggtc
gagcacagtgagacggtcctgggattcgctgacgcgctgcgctcgcgcatcctgggtcag
gagcacgccgtgcaggcccttgatcgcaacttgcgtgccgtcgccgcaggtctcaacacg
cccgacgcgcctgttggcgtattcctgctggtgggcccaagtggcgtaggcaagacggaa
acggccatggccctgggggatttgctctatggcggcgagcgctttgtcacgatcctgaac
atggctgaatatcaggaaaagcatgcgctgtctcgactcattggtgcacctcccggctac
gtcggctacggggagggcggtgtactgacggaagcggtgcgtcagcgcccgtattcagtg
gtgctgctggacgaagtggagaaggctgaccccgacgtgttgaatctgttttatcagatc
ttcgacaagggcctggccaacgacggcgaggggcgtgagatcgattttcgcaacacgctg
attctgatgacctccaacctgggcagcgaatgcatcaccaagctgtgtgccggcgctcag
cggcccgacccgcaggtactgcaagcggccatctatccgatgttgcgtgattatttcaag
ccggccctgctggctcgaatgcgtgtggtgccctattacccgatcgccggtgacgtgctt
cacgatctggccaggctcaagctggagcgtctcggctgcaggctgcaattgcgtcgtttg
tcgttcagctatacggacgatctggtcaagcacatggccgaacgttgcagccacagcgac
agtggcgcccgttatatcgaccaatggatcgacagctgcctgttgccgcagatggttgac
cggcttctggagaccatggctgtcggcgaatccgtagcgcgcgtgcatgccggtctggac
gccaacgcccagccgatctgcgagttcagccaatga
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