Pseudomonas quebecensis: OSC50_10370
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Entry
OSC50_10370 CDS
T10532
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pqe Pseudomonas quebecensis
Pathway
pqe02025
Biofilm formation - Pseudomonas aeruginosa
pqe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OSC50_10370 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
OSC50_10370 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pqe02044
]
OSC50_10370 (tssM)
Secretion system [BR:
pqe02044
]
Type VI secretion system
Imp/Vas secretion system core components
OSC50_10370 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UZW20716
LinkDB
All DBs
Position
2204396..2207779
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AA seq
1127 aa
AA seq
DB search
MSAFFKGVGALLRKIWLWSLLLVLGSALLVWFAGPLLAVADHRFWQSSTARLLTISALFL
AWGLAMVGAGGRRAARLRLPETEASHPRDGLVETEQRQVRGRFKEALHTLRTTRRYGERS
ARWRNELPWYLLIGEQGSGKSSLLAANGLVYPLDRSEARSSRANAYFDAYLADEAVVIEV
AGRYLTQPDVPVDGAGWSTLLGLLKSRHRARPLNGVVVTLAVETLLGMNEHDLDLHARRI
HTRLQDIQQRLHMDVPVYLILTQADRLPGFAEFFDSPMGDSAEAVLGEPLAAGKAGTEIG
HVREAFERLLQRLGAQVIARLHLERDVERRGQMLDFPRQVAHIGERLCLFVETAFCAHRF
QRINRLRGFYLACGASEDGRSYFVQGLFNRVIFAEADLAGLHTPERQRLRRRQGLGMLVA
SLLVVVAGIVWTHSYSVNHQRLLQLAQLLDIQPPDPAIADSTLALLPRLDSHRAATQVFP
PVAQVRMVERVGLFQGEAVRPLLSDVYDRTLHQQLLPQVVALLEEQVRASLGDRETLMDT
LRAYLMLNLPKRRDNAWLKERVAGHWSARYASDPSVQKRLNEHFSRLLEQPFVMPLSDDL
VAEARQQLRGESLAGVVYRALRHQARNLEPYRLVQGRGLSAPDEPIPGFFTRRYVQYFEK
QGPRLVNAIAQDNWVLGESGDLSPMDLRQLMLELEQRYFSEYADAWSHAIGQVRLLESDN
LRQHAETLADLASAQSPWVQLLHQLRENTRLVAQREHLEGVTRQVGELGVAAQAGAALLS
GSALPGQMAPDSARRALQRRFEPLHQLLDAEQNPREQLLQALRLLDEWQLQLAGLNRDDL
PEQAAFRMASRRMDGQQPQLGRLRDTAARLPQPLKGWFDSIADDSWRLLLDSAHAYVNQR
YQSELYGFYAKTIQRRYPFTASARTDVALEDFQEFFKPRGSLARFYDSHLRAFVSADGRR
YRLRSLDGRSLPMSRSLLDQLSKAQMIRQGFFNDEQEWAVRFSLAPYSLDPAVSRAMLSI
GDKQLEYRHGPIVPMVFDWPGEADQSRTSLVLERGAQRPLGIKDNSGAWSLFRFVELMQS
ELIDARQARLFKADLSGLRAHFLLSSQRNPVPLQWEQWRTFRLPEQL
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcattcttcaagggcgtgggcgcgttgctgcgcaaaatttggttatggagcctg
ttgttggtactgggcagcgcactgttggtatggtttgccgggccgctgttggcggtcgct
gaccaccgtttctggcaaagctcaacggcgcgtctgctgacgatcagcgcgttgtttctc
gcatgggggctggcgatggtgggggccggcggtcggcgtgccgcacggttgcgcttacct
gagaccgaggcgagtcacccgcgcgacggattggtggagacggagcaacgccaggtgcgc
gggcgtttcaaggaggccttgcacaccctgagaaccacgcggcgttacggtgagcgcagc
gcgcgctggcgcaacgagttgccttggtatttgttgattggcgagcaaggcagcggcaaa
agctctttgctggcggccaacggtttggtttacccgctcgatcgctcagaggcgcggtct
tcgagagcgaacgcttacttcgatgcctacctggccgacgaagccgttgtgatagaggtc
gccgggcgctatctgacgcagcctgacgtgccggtggacggtgcaggatggtcgacgttg
ctgggcctgctcaagtcgcgacaccgagcgcggccgctcaacggtgtggtggtgaccctg
gcggtggaaacgttgctgggcatgaacgagcacgacctcgacctgcatgcacgacggata
cacacgcgtctgcaagacatccagcaacggctgcacatggacgtgccggtgtacctgata
ctgacccaggccgaccgcttgccggggttcgccgaattcttcgactcccctatgggcgac
agcgcagaagcggtgctcggagagcccctggcggcaggcaaggccggcaccgagatcggc
catgtgcgcgaagcgttcgagaggttgctgcagcgtctgggcgcgcaggtgattgctcgc
ttgcatctggaacgtgatgtcgagcgccgcgggcagatgcttgacttcccccggcaggtt
gcccatatcggtgagcgtttatgcctgttcgtggaaactgcgttctgcgctcatcgcttc
cagcgcatcaatcgactgcgcgggttctacctggcctgcggggcgtcggaggacggacgt
tcttatttcgtgcagggcctgttcaaccgcgtgatctttgcggaggctgacctggcgggg
ctgcatacccccgagcgacaacgcctgcgccgccgccaaggccttgggatgctggtcgct
tcgttgctcgtggtcgtggcgggaatagtctggacacacagttactcggtcaaccaccag
cgcctgctgcaattggcgcaactgctcgatatccaaccgcccgatcctgccatagcggat
tccaccctggcactgctgccgcggctggacagccatcgggctgcgacccaggtattccct
cccgtggcgcaggtgcggatggtcgagcgggtagggttgttccaaggcgaggccgtccgt
ccgctgttatccgatgtttatgacaggacactgcatcagcaactgctgccgcaagtggtt
gccctgcttgaagaacaggtccgggccagcctgggcgatcgcgaaacgttgatggatacg
ttgcgggcgtacctgatgctcaacttgccgaaacgtcgtgataatgcctggctgaaggag
cgtgtggcgggtcattggtctgcacgttacgccagcgacccgtcggtgcagaagcgcttg
aacgagcatttctcgcgcttgcttgagcaaccgttcgtgatgcccttgagcgatgacctg
gtggccgaggctcgccaacaattgcgcggtgaatcgctcgccggcgtggtctatcgggcg
ctgcgtcaccaggctcgcaaccttgaaccttatcgactggtacaggggcgcgggctttcc
gcgccggatgaacccatccccggcttcttcacccggcggtacgtgcagtacttcgaaaag
caggggccgcgactggtcaacgccatcgcgcaggacaactgggtgctcggcgaaagcggt
gacctgagccccatggatttacgccagctgatgctggagctggagcaacgctatttcagc
gagtatgccgatgcgtggagccacgccatcggtcaggttcggctgttggagagcgacaac
ctgcgacagcatgccgagacgcttgccgacctggcatccgcccagtcgccgtgggtgcaa
ctgttgcatcagttgcgtgaaaacacccggcttgtggcgcaacgcgagcaccttgagggc
gtgacgcgccaagttggcgagctgggcgttgcggcgcaggcgggcgccgccctgttgtca
ggcagcgcgttaccggggcagatggcacctgattccgcgcggcgcgcgttgcagcggcgc
ttcgagcccttgcatcaattgctggatgcggagcagaacccacgtgaacaactgctgcag
gcgttgcggctgctggatgaatggcaactgcagttggcgggcttgaaccgcgatgacttg
cccgaacaggccgcgttcaggatggccagccggcgcatggatggccagcaaccgcaattg
gggcgtttacgtgatacggctgcgcgcctgccgcaacctctgaaagggtggttcgacagt
attgccgacgatagctggcggctgttgcttgacagcgctcatgcctatgtcaatcagcgc
taccagagcgaactctacggcttttacgccaagacgattcagcgtcggtatccattcact
gccagcgcacgcaccgatgtcgccctggaggattttcaggaattcttcaagccacggggg
agcttggcgcgcttctacgacagccatctgcgcgcgtttgtcagtgcagacggccgccgc
taccgcctgcgtagcctggacggccgcagcctgccgatgtcgcgctcgttgctggaccaa
ctcagcaaagcccagatgattcgtcaaggtttcttcaatgacgagcaggagtgggcggtg
cggttcagtctggcgccctacagcctggacccggctgtcagccgtgcgatgctgagtatt
ggcgacaaacagctcgaatatcgccacggacccatcgtgcccatggtgttcgactggccc
ggcgaggcggaccagagccgcaccagcctggtactggagcgtggcgcgcagcggccatta
ggcatcaaggataacagcggggcgtggtcattgtttcggttcgtcgagctgatgcaaagt
gagctcattgatgctcgccaggcccgcctgttcaaggctgatctctccgggctgcgtgcg
cacttcctgctttccagccagcgcaacccggtgccgctgcagtgggagcaatggcgcacc
tttcgcttgccggagcaactatga
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