Pseudomonas quebecensis: OSC50_14080
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Entry
OSC50_14080 CDS
T10532
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pqe Pseudomonas quebecensis
Pathway
pqe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OSC50_14080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pqe02000
]
OSC50_14080
Transporters [BR:
pqe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OSC50_14080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
DUF1846
Motif
Other DBs
NCBI-ProteinID:
UZW16529
UniProt:
A0ABY6Q953
LinkDB
All DBs
Position
3046972..3048003
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AA seq
343 aa
AA seq
DB search
MNPRNALSCLTLALFAAGAHAAPTLYLGMNGGTMERVYADKVLPAFEKANDVKVVIVPGT
SSDILAKVQANKDNPQMHVMFLDDGIMYRAISMGLCDKLAPSPTLEQIPPKAKIKDEAVA
VTLGVTGLGYNARLFKEKGWAAPTSWMDLADPRFKDKVVFQSLASSTFGLHGFLMFNRLQ
GGDETNVDPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAAIFPLTPTQVATQKLLGVP
MEYAQPKEGAVVLNVAECVIARNDQPELAQKLAAYLLTAEAQAPALEEGDQIPSNPTTPT
TDKTRARVEAMQGYLQTAISIDWDQVNQARPEWNARWSRSIER
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaacccacgcaatgcgctgtcctgcttgaccctcgccctgttcgccgccggcgcccat
gccgcgccgacgctgtacctgggcatgaacggcggcaccatggaacgggtgtatgccgac
aaagtactgcctgcgttcgagaaggccaacgacgtcaaggtggtgatcgtgcccggcacc
tcgtcggacattctcgccaaggtccaggccaacaaagacaacccgcagatgcacgtgatg
ttcctggacgacggcatcatgtaccgcgccatttccatgggcctgtgcgacaaactggcc
cccagcccgaccctggagcagattccgcccaaggcgaaaatcaaggacgaagcggtggcc
gtgactttgggcgtcaccggccttggctacaacgccaggctgttcaaggaaaaaggctgg
gccgcgcccacttcatggatggacctggccgacccgcgtttcaaggacaaagtggtgttc
cagtccctggcctcctccaccttcggcctgcacggtttcttgatgttcaaccgtttgcag
ggcggcgacgagaccaacgtcgaccccggcttcaaggcctggccgaaaaccatcgggccc
aacgtgctggaatacatcgccagctcggcgaaaatctccgagatggtgcaaaccgacgaa
gccgcgatctttcccctcactccaacccaggtcgccacgcagaaactgctcggcgtaccg
atggaatatgcgcaaccgaaggaaggcgcggtggtgctgaacgtcgccgaatgcgtaatt
gcccgcaacgaccagccggagctggcgcagaaactcgcagcctacctgctgaccgccgag
gcccaggcaccggcgctggaggaaggtgaccagatcccctcgaacccaaccacgccgacc
accgacaagacccgcgcgcgggtggaagcgatgcaggggtatttgcagacggcgatttca
attgactgggaccaggtgaaccaggcgcggccggagtggaatgcgcggtggagccggtcg
attgagcggtag
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integrated database retrieval system
