Pseudomonas quebecensis: OSC50_16055
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Entry
OSC50_16055 CDS
T10532
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pqe Pseudomonas quebecensis
Pathway
pqe03018
RNA degradation
Brite
Enzymes [BR:
pqe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OSC50_16055
Messenger RNA biogenesis [BR:
pqe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OSC50_16055
Ribosome biogenesis [BR:
pqe03009
]
Prokaryotic type
rRNA helicases
OSC50_16055
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Ortholog
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Gene cluster
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Other DBs
NCBI-ProteinID:
UZW16899
LinkDB
All DBs
Position
complement(3456735..3458408)
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AA seq
557 aa
AA seq
DB search
MTQETGGFAAFNLNPNILAAVAATGYEEPSAIQQQSIPIIMAGKDMIGQAQTGTGKTAAF
ALPILHCIDPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK
AIRNGAQIVVATPGRLCDHLRRDEKVLSTVNHLVLDEADEMLKLGFMDDLEVIFKSLPAT
RQTVLFSATLPQSIRAIAERHLRDPEHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL
EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLAPLVADAESTHGDLLDRLTADIGCTPRAL
AAALLRKATNGQALTLAAIEKERPLVPNSAPRGDRPERSGDRPDRGDRERRAPVPLAEGR
ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLEKLLTKLK
DTRVAGKQLKLRRYRED
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaaccggcggcttcgccgcttttaatcttaacccgaacattcttgcagcc
gtcgcagcgaccggctacgaagaaccttcggctatccagcagcaatcgatcccgatcatc
atggccggcaaggacatgatcggccaggcgcaaaccggtaccggtaaaaccgccgcgttc
gccctgcctatcctgcactgcatcgatcctgccaagcgcgaaccgcaagccctgatcctg
gcgccaacccgcgagttggcgctgcaagtagcaaccgcttttgaaacctacgccaagcaa
atgccgggcgttactgtcgtggccgtctacggcggtgcgccgatgggcccgcagctcaag
gccatccgcaacggcgcgcagattgttgtcgccactccaggccgtctgtgcgaccacctg
cgtcgcgacgagaaagtcctgtcgaccgtaaaccacctggtgctcgacgaagctgacgaa
atgttgaagctgggcttcatggatgacctggaagtcatcttcaagtccctgccggcgacc
cgtcagaccgtactgttctcggccaccctgccacagtcgatccgtgccattgccgaacgc
cacctgcgcgatccggagcacgtgaagatccagaccaagactcagaccgtgaccgcgatc
gaacaggctcacctgttggttcacgctgaccagaagacctcggcggtattgagcctgctg
gaagtcgaagacttcgatgccctgatcatgttcgtgcgcaccaagcaagcgaccctggac
ctggccagcgccctggaagccaaaggctacaaggccgctgcgctgaacggcgacattgcc
cagaaccagcgtgagcgcgtgatcgactccctcaaggatggccgtctggacatcgttgtg
gcgactgacgttgccgcccgtggcctcgacgttccacgtatcacccacgtgttcaacgtt
gacatgccttacgaccccgagtcctacgttcaccgtatcggccgtaccggccgcgccggt
cgcgaaggtcgcgcactgctgctggtgacgccacgtgagcgccgcatgctgcaggtgatc
gaacgcgtcaccggtcagaaagttgcagaagtccgcctgccggatgcccaggccgttctc
gatgcccgcatcaagaaactgaccaacagcctggcacccctggtggctgacgctgaatcg
acccacggcgacctgctggatcgcctgaccgccgatatcggttgcactccacgtgccctg
gccgctgcgctgctgcgcaaagcgaccaacgggcaggccctgaccctggcagccatcgag
aaagaacgtccactggtaccgaacagcgcgccacgcggtgatcgtccagagcgttccggc
gaccgtccagaccgtggtgatcgtgagcgtcgcgctccggttccattggctgaaggtcgt
gcccgttgccgtaccgccctgggcgcgcgcgatggtatcgctgccaagaacctgctgggc
gctatcctcaacgagggtggtctggcacgtgaagccatcggtcgtatccaggtccgcgac
agcttctccctggtggagctgccggaagacggtctggaaaaactgctgaccaagctcaaa
gacacacgcgttgccggtaagcagctgaagctgcgtcgctaccgcgaagattga
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