Pseudomonas quebecensis: OSC50_22185
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Entry
OSC50_22185 CDS
T10532
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pqe Pseudomonas quebecensis
Pathway
pqe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OSC50_22185 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pqe03019
]
OSC50_22185 (orn)
03009 Ribosome biogenesis [BR:
pqe03009
]
OSC50_22185 (orn)
Messenger RNA biogenesis [BR:
pqe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OSC50_22185 (orn)
Ribosome biogenesis [BR:
pqe03009
]
Eukaryotic type
Pre-60S particles
RNases
OSC50_22185 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UZW18058
LinkDB
All DBs
Position
complement(4749134..4749676)
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatttggatcgatctggaaatgaccggtctgaaccctgac
accgacgtcatcatcgagatggcgacgattgtcaccgacagcaacctcaacaccttggcc
gaaggtccggtgatcgccatccatcacagcgacgcggtgctcgccactatggatgagtgg
aatacccgcacccacggtaactccggcctgacccagcgtgtgcgcgacagccgtatcagc
atggccgaggccgaggcccagaccatcgccttcctggaacagtgggtgcccaaaggcaaa
tcgccgatctgtggcaacagcatctgccaggatcgtcgcttcctttatacccacatgaag
gccctggaaagctatttccattaccgcaacctggacgtgtccacgctcaaggaactggcc
gcgcgctgggcgccggaagtcaaagacagtttccacaaaggcagcactcacctggcgctg
gatgacattcgcgagtcgattgccgagctgcagcattaccgcaagcatttcatcaaggct
tga
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