Pseudomonas quebecensis: OSC50_24645
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Entry
OSC50_24645 CDS
T10532
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pqe Pseudomonas quebecensis
Pathway
pqe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OSC50_24645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pqe03021
]
OSC50_24645
Transcription machinery [BR:
pqe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OSC50_24645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_23
GerE
HTH_32
HTH_40
HTH_11
HTH_20
HTH_24
HTH_7
TnsD
HTH_Tnp_4
Trp_repressor
HAC6_helical
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
UZW18524
UniProt:
A0ABY6QEW4
LinkDB
All DBs
Position
complement(5321837..5322343)
Genome browser
AA seq
168 aa
AA seq
DB search
MSPPTHTAAVQNIYEEHHTWLQGWLKGKLHNACDAADVAHDTFVRILGGRHASQILEPRD
YLATIARGLVIDRYRRHTIEQAYKEALAERPEPTVVSEEDRAIIIETLTAVDKALHGLGA
RARRIFMLSQFEGLTYQQIADQLQVSLTTVKKHMIRAFTECSLILASS
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctcctactcatacggcagctgttcagaacatctacgaggaacaccacacgtgg
ttacaggggtggctcaaaggtaaattgcataacgcctgcgatgcagccgatgttgcccac
gatacgttcgtgcgtattttaggtggacgacatgcctcccagatcctcgaaccgcgggat
tacctggccacgatcgccaggggtctggtgattgatcgttatcgccgccataccatcgaa
caggcctataaggaggctttggccgagcgccctgaacccactgttgtcagtgaagaggac
agggcgatcatcatcgaaaccctgacggctgtggataaagccctgcatggactcggggcg
cgcgcgcgaaggatcttcatgctgtctcagttcgaggggctgacttatcaacagatcgcc
gatcaattacaggtttcgctgaccacggtgaagaaacacatgatccgggcgtttaccgaa
tgttcattgatcctggccagcagctga
DBGET
integrated database retrieval system
