Pseudomonas quebecensis: OSC50_24895
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Entry
OSC50_24895 CDS
T10532
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pqe Pseudomonas quebecensis
Pathway
pqe03420
Nucleotide excision repair
pqe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OSC50_24895 (uvrD)
03430 Mismatch repair
OSC50_24895 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqe03400
]
OSC50_24895 (uvrD)
Enzymes [BR:
pqe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OSC50_24895 (uvrD)
DNA repair and recombination proteins [BR:
pqe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OSC50_24895 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
OSC50_24895 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UZW18573
UniProt:
A0ABY6QGC2
LinkDB
All DBs
Position
complement(5378038..5380221)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIREHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCEQMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFETTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSNMFAGSEIPETPFSLGQQVKHAIFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttttgcttaattccctcaacgatgcccaacgccaggccgta
gccgcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcgtccccgcattccatcctg
tcggtgaccttcaccaacaaggcggccgccgagatgcgccaccgcatcgaacagctgatg
ggtatcagcccggccggcatgtgggtcggtacgttccacggcctggcacaccgcctgttg
cgtgcgcactggcaggaagcgggcctgagccagacgttccagatcctcgacagtgacgac
cagcaacgcctggtcaagcgcgtcattcgcgagttgggcctggacgaacagcgttggccc
gcgcgtcaggcccagtggttcatcaacggccagaaagacgaaggcctgcgcccgcaacat
atccaggccagcggcgacttgttcctggccaccatgcgcagcatttatgaggcgtacgaa
gcggcctgcgtgcgcgccggcgtgatcgacttctccgaactgctgttgcgcgccctcgac
ctgtggcgcgataacccaggcttgctggcccattatcaaaagcgcttccgccacatcctg
gtggacgagttccaggacaccaacgccgtgcaatacgcctggttgcgcctgttggccaag
ggcggcgacagcctgatggtagtgggcgatgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaacatttaccagtattccgaggatttcccggacgcggtgacgattcgc
ctggagcagaactaccgctccactgccggcattctcaaagccgccaacgccttgatcgcc
aacaataccgggcgcctgggcaaagagttgtggaccgacggcggcgaaggcgaagcgatc
aatctgtacgccgccttcaacgaacacgacgaggcgcgctatgtggtggaaaccatcgaa
agcgccctgaaaaccggcctggcgcgcagcgacatcgccatcctgtaccgctccaacgcc
caatcgcgggtactggaagaagccttgttgcgcgagcgcatcccgtatcgcatctatggc
ggccagcgcttcttcgaacgcgcggaaatcaagaacgccatggcctacctgcgcttgctg
gaaggccggggcaacgatgcggcgctggaacgggtgatcaatattccggctcgtggcatc
ggtgagaaaaccgttgaagcgatccgcgagcacgcgcgtcacgccgatgtgtcgatgtgg
gaggccatgcgcctgctgatcgccaacaagggcctgaccggtcgagcggccggggcgctg
ggcgtgtttgtcgaactgatcgagaaccttgcggccaagtgcgagcagatgcccctgcac
ttgatgacccagaccgtgatcgaacaatccgggctgattgcctaccacgaggcggaaaaa
ggcgagaaaggccaggcccgggtggaaaaccttgaggaactggtgagcgcggcccgcgcc
ttcgagaccaccgaagaagacgaagagctgaccccgctcgccgcgttcctcggccacgcg
tcgctggaagccggcgatactcaggccgacgagcacgaagacagcatccagctgatgacc
ctgcacagcgccaagggcctggaattcccctacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaacctggccgccttgaggaagagcgccgcctg
gcctacgtcggtatcactcgggcgatgcagaacctggtgatgacttacgctgagacccga
cgactctacggcagcgagacctacaacaaggtatcgcgcttcgtacgcgaagtgccgaaa
gggctgattcaggaagtgcgcttgtccaacagcgtcagtcgcccgttcggcggtggtcag
caacagaattccagcaacatgttcgccggttccgagattccggaaacgccgttcagcctg
ggccagcaggtcaaacatgcgatcttcggtgaaggcgtgatcctcaacttcgaaggcgcc
ggtgcccaggcccgcgtgcaggtgaacttcgccgagggcagcaagtggctgatgatgggc
tacgccaagctcgaagcgatttga
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integrated database retrieval system
