Pseudomonas quebecensis: OSC50_25200
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Entry
OSC50_25200 CDS
T10532
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pqe Pseudomonas quebecensis
Pathway
pqe02025
Biofilm formation - Pseudomonas aeruginosa
pqe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OSC50_25200 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
OSC50_25200 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pqe02044
]
OSC50_25200 (tssM)
Secretion system [BR:
pqe02044
]
Type VI secretion system
Imp/Vas secretion system core components
OSC50_25200 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
T7_gp14
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
UZW18632
UniProt:
A0ABY6QH01
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All DBs
Position
5457197..5460697
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AA seq
1166 aa
AA seq
DB search
MKAFFSFMIRWVIPVLGLIALSLIIWFVGPLLDVLVPEGRRWALIVLMFAVWIAYRVFRI
IQARRQAAEVMRSLAADTPVDPNSVATAEELATLRQRMDEALTLLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSTVDKAAWLGFLDLLKKQRSRRPIDGAFIAISLSDLLLGTDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEERAQVWGMTFALDDGKNNDSP
LAHLQSEFAGLEQRLNERLVERLQQERDPARRDLIYGFAQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQSGTGRSYFIEKLFTAV
AFAERGLVGVNPKVERRRKWIARGVLAATVALVIVVSSLWWVSYRANQAYIAQVDQKVAP
LGQTVQNLSPAQRDVLAVLPLLNAVKNLAGDSPSWSEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRIEEQLHGGGNSDFLYEGLKAYLMLADSEHYDPDFIKAWIALDWDRNLPRD
LPADQRQALAGHLQALFERHPPNARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPEGI
PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQAFLLSSLNQTGTLAEEQWVL
GREQADQQNVVSLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQAEERQLAAKGAPVEGGVDKLKERLGSLLGQEQPTTNAPAATDDPV
TAHFAELNSIVSKNEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSAQTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRSGGTQPIVRFELKPVSMDPSITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSIGVVRISIMPPSASGRSGVTLDGPWAWFRLLEQSDLTPGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagtttcatgattcgctgggtgatcccggtgctgggcctgatcgcc
ctgagcctgatcatctggtttgtcgggccgctgctcgacgtgctggtgccggaaggccgc
cgctgggcgttgatcgtcctgatgttcgcggtgtggatcgcctaccgcgtgttccgcatt
atccaggcgcgccgccaggccgccgaagtgatgcgcagcctggcggcggatacgccggtg
gaccccaacagcgtggccaccgccgaagaactcgccaccctgcgccagcgcatggacgag
gccctgacgctgctcaagaaagccaaactgggcggcgacgagcggcgcaacctctacgaa
ctgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccaccgcgctggtcaac
tccggcctgcactttccgctggccgcgcagctgggcgccggtgcggtgcgcggtgtcggc
ggtacgcgtaactgcgactggtggttcaccgaccaggccgtactgctcgacaccgctggt
cgctataccacccaggacagcaactccacggtggataaagctgcgtggctgggctttctc
gacctgctgaaaaaacaacgctcgcgccgccccatcgacggcgcattcattgcgatcagc
ctctcggatctgctgctcggcaccgacgccgagcgcgccgcccacgcggcggcgattcgc
ctgcggatccaggagctgtatacgcaattgggcgtgcgctttccgatctacctgatgctg
accaagctcgatctggtccccggcttcatggagttcttcgacaacctgagcaaggaagag
cgcgcccaggtgtggggcatgacctttgccctggacgacggtaaaaacaatgacagcccg
ctggcgcacctgcagagcgagttcgccggactcgaacagcgtctcaacgagcgcctggtg
gaacgtctgcaacaagagcgcgacccggcgcggcgcgacctgatctacggcttcgcgcag
caattcggcgccttgaaggattgcctgcagagtttccttgagggcgtgtttaaacccaac
gcctttgaagagcgtgtattgctgcgtggcgtgtacttcaccagtggcacccaggaaggc
agcccgattgaccgcctgatcggcgccatggcccagagcatgaacctggaccgccagcac
ctggcgcgccagagcggcaccgggcgcagttatttcatcgaaaaactctttaccgccgtg
gcctttgccgagcgtgggctggtgggtgtgaacccgaaagtcgaacgccggcgcaagtgg
attgcgcgcggtgtactcgcggccaccgtggctttggtgatcgtggtcagcagcctgtgg
tgggtgagctatcgcgccaaccaggcctatatcgcccaggtcgaccagaaggtcgcgccc
ctgggccagaccgtacagaacctcagcccggcgcagcgcgacgtgctcgcggtgctgccg
ctgctcaatgcggtgaaaaacctggcgggggattcgccgagttggtccgagggcctgggg
ttgtaccagggcgacatgctcgaagccgagtccgccagcgtctaccgcaaattgttgatc
gccgtattcgccccgcgactggtgacgcgcatcgaggagcaactgcacggcggcggcaac
tccgacttcctctacgaaggcctcaaggcttacctgatgcttgccgacagcgagcattac
gacccggatttcatcaaggcgtggatcgccctggactgggaccgcaacctgccacgggat
ctgccggccgatcagcgccaggcgctggccgggcatttgcaggccctgttcgaacggcat
ccgccgaacgcacgcctggacccacgcctgatcgacgatctgcgccgccaactgcaacag
ttgccggtggcgcagcgtgtatatgaccgggtcaaacgccagaaactgcccgaaggcatc
ccggactttcgcatcaacgaagccgccgggcgtgatgccgcgctggtgttcagccgcaag
agcggcaagcccctgggcgagccgttgagtgggttctttaccgccaagggttatcgtcag
gcattcctgctgagcagcctgaaccagaccggcacgctggccgaagaacagtgggtgctg
ggccgcgagcaggccgatcagcagaacgtggtgagcctggccgccgatgtgcgccgcctg
tatttccaggactaccagcgccaatgggacgccttgctcgccgacatcgactttgtgccg
atcaccagcgtggcccaggccgccgatgtgctgcgggtgatttccgggccgacctcgccg
ctgaaaaagctgctggtggcggtggccaaggaaaccgacctgcaagccgaagaacgccaa
ttggcggccaaaggcgcgccggtggaaggcggcgtcgacaagctcaaggagcgcctcggc
agcttgctgggtcaggagcaacccacaaccaacgcgccggcggcgacggacgatccggtc
accgcgcacttcgccgaactcaacagcatcgtcagtaaaaatgaaggcgagccggcggcc
atcgacggcctgttggcggacatgaatgcgctgtatgtgcaggtcagcgccatggtcggc
gccagtggcgacgcgctgctcggcgaggccaagaaccaggcagcggctgcggctacgcgc
gtcagcctgaatgccgaacgccagccgccgctggtgcagggcatggtcaagtcggtggtc
aactccaccaccaacagcatgatgggcggggtgcgtaaccaactgaacgcggcctgggtc
agcgaagtggtcaacgtgtatcgccagtcgctggcggggcgttatccgatgtcacccggc
agcgcacgggacgccacgctggatgatttcggccagttcttcggcgtcggcggggtgatg
gacaattatttccgcaaatacctgcagccctacgtggacacctccgcgcaaacctggcgc
tggcagccgggcgcggcgcagaaactggggatcgcgccgggcgtgctgcagaccttccag
cgcgccgcgacgattcgcgatgcgttcttccgctccgggggcacccaaccgattgtgcgt
ttcgagcttaagccggtgtcgatggacccaagcatcacccagttcctgctcgacctggac
ggccagcaactgagctacgaccatggcccgagtcgtccggtggcgatgcaatggccgaac
cccggcagtattggcgtggtgcgtatctccatcatgccgccgtcggccagtggccgttcc
ggcgtaaccctcgacggcccgtgggcctggttccgcctgctggaacagtcggacctgacc
cccggcaactcaccggaccgtttcaacctgcgcctgcgcgtcgatggcgcgagtatcgct
tacgagctgcgcgccaacagtgccttcaacccgttcaagagtcgcgtgctcagcggcttc
agcctgccggagcggctatga
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