Pseudomonas quebecensis: OSC50_25775
Help
Entry
OSC50_25775 CDS
T10532
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pqe Pseudomonas quebecensis
Pathway
pqe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pqe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSC50_25775 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pqe03021
]
OSC50_25775 (rho)
03019 Messenger RNA biogenesis [BR:
pqe03019
]
OSC50_25775 (rho)
Transcription machinery [BR:
pqe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
OSC50_25775 (rho)
Messenger RNA biogenesis [BR:
pqe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OSC50_25775 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
NACHT
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
UZW18741
UniProt:
A0ABY6QH40
LinkDB
All DBs
Position
5576031..5577290
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITDLLQLAEEMGIENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN
FDRPENAKNKILFENLTPLFPTVRMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIAANIARNNPEVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI
NRSGTRREELLTADDELQRMWILRKLLHPMDEVAAIEFLIDKLKTTKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgaactcaagcaaaagccgattaccgacctgctccaattggccgaagaa
atgggcatagaaaatatggcccgttcgcgcaagcaggacgtgattttctccctgctgaaa
aagcacgcgaaaagcggcgaggaaatctccggtgatggcgtgctggagattctccaggac
ggcttcggcttcctccgctctgcagacgcttcctatctcgccggccctgacgatatctac
gtctcgccgagccagatccgccgcttcaacttgcgcaccggtgacaccatcgttggcaag
atccgtcctcctaaggaaggcgagcggtatttcgccctgctcaaggtcgatacgatcaac
ttcgatcgtcccgagaacgcgaaaaacaagattctctttgagaacctgacgccgctgttc
cccaccgtgcgcatgaagatggaagccggtaacggttccaccgaagacttgaccggccgt
gtgattgatctgtgcgcgccgatcggcaagggccaacgcggcctgatcgtcgcgccgccg
aaagccggcaagaccatcatgctgcagaacattgccgcgaacattgcacgtaacaaccct
gaagttcacctgatcgtgctactgatcgatgagcgtccggaagaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggttgcctcgacgttcgatgagccgccaacccgccacgtg
caggttgccgaaatggtgatcgagaaggccaagcgcctggtcgaacacaagaaggacgtg
gtgatcctgcttgactccatcacccgtctggcccgtgcctacaacaccgtgatcccgagc
tccggcaaggtattgaccggtggtgtcgacgcccacgccctggagaaaccgaaacgtttc
ttcggtgccgcgcggaacatcgaagaaggcggctcgctgaccattatcgccaccgcgctg
gttgaaaccggctcgaagatggacgaagtgatctacgaagagttcaagggcaccggcaac
atggaactgcccctggatcgccgtattgcagaaaaacgcgtcttcccggccatcaatatc
aaccgctccggcacccgccgcgaagagttgttgaccgccgacgacgaactgcaacgcatg
tggatcctgcgcaagttgctgcatccgatggatgaagtggccgccatcgagttcctcatc
gacaaattgaaaaccaccaagaccaacgacgagtttttcctgtcgatgaagcgtaagtaa
DBGET
integrated database retrieval system
