KEGG   Pseudomonas qingdaonensis: KH389_02400
Entry
KH389_02400       CDS       T07622                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pqi  Pseudomonas qingdaonensis
Pathway
pqi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pqi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    KH389_02400 (orn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pqi03019]
    KH389_02400 (orn)
   03009 Ribosome biogenesis [BR:pqi03009]
    KH389_02400 (orn)
Messenger RNA biogenesis [BR:pqi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KH389_02400 (orn)
Ribosome biogenesis [BR:pqi03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    KH389_02400 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QVL19458
UniProt: A0ABX8DT99
LinkDB
Position
521821..522363
AA seq 180 aa
MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGNSGLTQRVRESKVSMAEAEAETIRFLEQWVPKGKSPICGNSICQDRRFLYRHMR
ELENFFHYRNLDVSTLKELAARWAPEVRDSFKKGGTHLALDDIRESIAELRHYREHFIKF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcagaacccacagaacctgatctggatcgatctggaaatgaccggcctggatccggac
agcgacgtcatcatcgagatggccaccatcgtcaccgacagtgacctgaacaccctggcc
gaaggtccggtgatcgccatccaccacagtgacgaggtgctggcgcgcatggacgagtgg
aacacccgtacccacggcaactccggcctgacccagcgcgtgcgcgagagcaaggtgagc
atggccgaggccgaggccgagacgatccgcttcctggagcagtgggtgcccaagggcaag
tcgccgatctgcggcaacagcatctgccaggaccgtcgcttcctgtaccgccacatgcgc
gagctggaaaatttcttccactaccgcaacctggacgtgtccaccctcaaggagctggcc
gcacgctgggctcccgaggtgcgcgacagcttcaagaagggtggcacgcacctggcgctg
gacgatattcgcgaatccatcgccgagctgcgccactaccgcgagcacttcatcaagttc
tga

DBGET integrated database retrieval system