Pseudomonas qingdaonensis: KH389_02400
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Entry
KH389_02400 CDS
T07622
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KH389_02400 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pqi03019
]
KH389_02400 (orn)
03009 Ribosome biogenesis [BR:
pqi03009
]
KH389_02400 (orn)
Messenger RNA biogenesis [BR:
pqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KH389_02400 (orn)
Ribosome biogenesis [BR:
pqi03009
]
Eukaryotic type
Pre-60S particles
RNases
KH389_02400 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QVL19458
UniProt:
A0ABX8DT99
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All DBs
Position
521821..522363
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AA seq
180 aa
AA seq
DB search
MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGNSGLTQRVRESKVSMAEAEAETIRFLEQWVPKGKSPICGNSICQDRRFLYRHMR
ELENFFHYRNLDVSTLKELAARWAPEVRDSFKKGGTHLALDDIRESIAELRHYREHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccacagaacctgatctggatcgatctggaaatgaccggcctggatccggac
agcgacgtcatcatcgagatggccaccatcgtcaccgacagtgacctgaacaccctggcc
gaaggtccggtgatcgccatccaccacagtgacgaggtgctggcgcgcatggacgagtgg
aacacccgtacccacggcaactccggcctgacccagcgcgtgcgcgagagcaaggtgagc
atggccgaggccgaggccgagacgatccgcttcctggagcagtgggtgcccaagggcaag
tcgccgatctgcggcaacagcatctgccaggaccgtcgcttcctgtaccgccacatgcgc
gagctggaaaatttcttccactaccgcaacctggacgtgtccaccctcaaggagctggcc
gcacgctgggctcccgaggtgcgcgacagcttcaagaagggtggcacgcacctggcgctg
gacgatattcgcgaatccatcgccgagctgcgccactaccgcgagcacttcatcaagttc
tga
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